Non-Coding RNA Search

Ss1.1-Pey1-56F01.5

Sequence:


               
               GTATAATCTGAATGTAACTAAAGTTTCCTTTGGCCATCCTCTGAAGTTCTAGCTCGTCTC
CCCTCCCCACAGTTTTATGTGTCTCCTTCCATAGAAATGTATCGATGTAGATACTTTGAA
TGACTCCTCCCGTCTTATAGAGATTTTACTGTAAGCTGTGTTTTTTTTTTCACTGTCTTC
GATTGCTAAGATATACTCATATTGATACAATAGTTCTCACCAGTTCCTTTTAATAGTTGT
GTTATAATCACTCCTATGCATGTGCCACATTTTTTTCTTCCCTAAGATCCATAGATAGTT
TGTTGCATCCTTTTCTTTCCTCCCTCATAAGCAGGCTGCAGAAAAGCCTTATACATGCCT
CCTCTGTAATGTTTCTTTAGAATAGTGTTTAAAAAGTGGAATTGGGGGAGTTCCCATGTG
GCTGAGCAGGTTAAGGATCTGGCATTATCATTGTAGTGGCTCAAGTTGCTGCTTCCAGGA
ACTTCCACATGCCGAGAGTGTGCCCTCCCCTGCATCGATAAGTAGAATTTTGGCTCTCAC
AAGTTCCACATTTTTAGTTTTAGACATTACCAAAGTGTTCTCCATGATTTCTGTACCATT
TAAACTTCTAGCCAGAGGGTGTGCGGGGACTGCAGTCCCCACACCATAAGCAGTTATTTT
AAATGTTTGCCAATCTGATGGATGAAAAATTGAATCGTTTAAAAAAATTTATGCATACTT
GTTTGCTAGTGAGATTTTCATATGTGTATTAGGCATTTGTGTTTTTTATTTTCTGAATAA
TCTGTTTATTTTTGCTCATTTAAAAATTAGGTTGTTTGTCTATCTTAATGATTTATGAGT
TTCCTAATATAACCTAGATATCAATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGGCAAATGTTTTCTTCCAGCTGGTCTATTGCCTTCAAATTTTGTAGGAGCTT
TTGTTAGACAGAAGTTATCAATTTTGACATAATCAAATTTATCTGTTCCTTTGTTCTTTT
TATTTATACATCATGTTTAGGCTTTTCTTACTACTAAGGTTTAAATACATTCTGAATTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTATAATCTGAATGTAACTAAAGTTTCCTTTGGCCATCCTCTGAAGTTCTAGCTCGTCTC
CCCTCCCCACAGTTTTATGTGTCTCCTTCCATAGAAATGTATCGATGTAGATACTTTGAA
TGACTCCTCCCGTCTTATAGAGATTTTACTGTAAGCTGTGTTTTTTTTTTCACTGTCTTC
GATTGCTAAGATATACTCATATTGATACAATAGTTCTCACCAGTTCCTTTTAATAGTTGT
GTTATAATCACTCCTATGCATGTGCCACATTTTTTTCTTCCCTAAGATCCATAGATAGTT
TGTTGCATCCTTTTCTTTCCTCCCTCATAAGCAGGCTGCAGAAAAGCCTTATACATGCCT
CCTCTGTAATGTTTCTTTAGAATAGTGTTTAAAAAGTGGAATTGGGGGAGTTCCCATGTG
GCTGAGCAGGTTAAGGATCTGGCATTATCATTGTAGTGGCTCAAGTTGCTGCTTCCAGGA
ACTTCCACATGCCGAGAGTGTGCCCTCCCCTGCATCGATAAGTAGAATTTTGGCTCTCAC
AAGTTCCACATTTTTAGTTTTAGACATTACCAAAGTGTTCTCCATGATTTCTGTACCATT
TAAACTTCTAGCCAGAGGGTGTGCGGGGACTGCAGTCCCCACACCATAAGCAGTTATTTT
AAATGTTTGCCAATCTGATGGATGAAAAATTGAATCGTTTAAAAAAATTTATGCATACTT
GTTTGCTAGTGAGATTTTCATATGTGTATTAGGCATTTGTGTTTTTTATTTTCTGAATAA
TCTGTTTATTTTTGCTCATTTAAAAATTAGGTTGTTTGTCTATCTTAATGATTTATGAGT
TTCCTAATATAACCTAGATATCAATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGGCAAATGTTTTCTTCCAGCTGGTCTATTGCCTTCAAATTTTGTAGGAGCTT
TTGTTAGACAGAAGTTATCAATTTTGACATAATCAAATTTATCTGTTCCTTTGTTCTTTT
TATTTATACATCATGTTTAGGCTTTTCTTACTACTAAGGTTTAAATACATTCTGAATTCC

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

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               5-403, gnl|bosTau2|chr13 (49233182-49233582)
               

               
               5-403, gnl|Hg17|chr20 (35560417-35560021)
               


               
               517-1080, gnl|bosTau2|chr13 (49233570-49234112)
               

               
               517-1080, gnl|Hg17|chr20 (35560033-35559496)
               

               
               517-1080, gnl|Mm7|chr2 (157283160-157282675)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-403, gnl|bosTau2|chr13 (49233182-49233582)
               

               
               5-403, gnl|Hg17|chr20 (35560417-35560021)
               


               
               517-1080, gnl|bosTau2|chr13 (49233570-49234112)
               

               
               517-1080, gnl|Hg17|chr20 (35560033-35559496)
               

               
               517-1080, gnl|Mm7|chr2 (157283160-157282675)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               aor (0.195274)
               

               
               sug (0.127291)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               sug (0.127291)

	5-403, gnl\|bosTau2\|chr13 (49233182-49233582)
	5-403, gnl\|Hg17\|chr20 (35560417-35560021)

	517-1080, gnl\|bosTau2\|chr13 (49233570-49234112)
	517-1080, gnl\|Hg17\|chr20 (35560033-35559496)
	517-1080, gnl\|Mm7\|chr2 (157283160-157282675)