Non-Coding RNA Search

Ss1.1-Pey1-57A04.5

Sequence:


               
               CATTATATGGTGTGTTAGACATTAGCAAATGCAAAGAGGAAAACCCGTGTACATTTCACT
CCCTCACTTTCTACATGCAAGTCCTGAAATTGCAAAAACAATTGAAGGCTTAAATCCAAA
TCAAGAAGAACATAGCACTTACTTAGATGTTGAACCTATAACTGGATTCACTTTACGATT
TGCACAACGGCTACAGATCAACTTACTGGTCAAGCCAGCAAGAATAATTGAGGCATTAAA
AAATCTGAAGCAGAACTATATAGTACCTGTTCTTTGGCTTAATGAGACTGGTACAATTAG
TGATGAGAAGGCAGAAATGTTCAGAAAACAAGTGACTGAAAAAATAAACCTCCTTGGCCT
AGTAGAAATGATTTTACTGAGTGTTGGTGTGGTGATGTTTATTGCTTTTATGATTTCATA
CTGCACATGCAGATCAAAGAAAGTAAATTAGGAAGCAAATGAGTCTTTACGTTTATGCAC
CAGCTACATCAGGACCTTTCTTAATATCCACCTACAAAATGAAGATGCAATATGCTTTAT
TTTTGCAAAATATACCTTATCATATAGTTGAAGAACAGGTGTCACTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTATATGGTGTGTTAGACATTAGCAAATGCAAAGAGGAAAACCCGTGTACATTTCACT
CCCTCACTTTCTACATGCAAGTCCTGAAATTGCAAAAACAATTGAAGGCTTAAATCCAAA
TCAAGAAGAACATAGCACTTACTTAGATGTTGAACCTATAACTGGATTCACTTTACGATT
TGCACAACGGCTACAGATCAACTTACTGGTCAAGCCAGCAAGAATAATTGAGGCATTAAA
AAATCTGAAGCAGAACTATATAGTACCTGTTCTTTGGCTTAATGAGACTGGTACAATTAG
TGATGAGAAGGCAGAAATGTTCAGAAAACAAGTGACTGAAAAAATAAACCTCCTTGGCCT
AGTAGAAATGATTTTACTGAGTGTTGGTGTGGTGATGTTTATTGCTTTTATGATTTCATA
CTGCACATGCAGATCAAAGAAAGTAAATTAGGAAGCAAATGAGTCTTTACGTTTATGCAC
CAGCTACATCAGGACCTTTCTTAATATCCACCTACAAAATGAAGATGCAATATGCTTTAT
TTTTGCAAAATATACCTTATCATATAGTTGAAGAACAGGTGTCACTTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q9CT95_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9CT95_MOUSE

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               285-459, gnl|bosTau2|chr4 (14781189-14781364)
               

               
               285-459, gnl|Hg17|chr7 (79947948-79948120)
               

               
               285-459, gnl|Mm7|chr5 (16799407-16799232)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               285-459, gnl|bosTau2|chr4 (14781189-14781364)
               

               
               285-459, gnl|Hg17|chr7 (79947948-79948120)
               

               
               285-459, gnl|Mm7|chr5 (16799407-16799232)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.286369)
               

               
               lun (0.150489)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.286369)
               

               
               lun (0.150489)

	285-459, gnl\|bosTau2\|chr4 (14781189-14781364)
	285-459, gnl\|Hg17\|chr7 (79947948-79948120)
	285-459, gnl\|Mm7\|chr5 (16799407-16799232)