Ss1.1-Pey1-58G05.5
|
AAGTCTGTGCAGAACTTAGCAAATCTGTGGAATTTGGAGCTAAGGAGCCTTACATGGAAG
GTGTCAATCCATTCATCAAAAGTAACAAGCATCGTATGATCATGTTTTTAGATGAGCTTG
GGAATGTACCTGAACTTCCGGACACTACAGAGCATTCTAGAACTGACCTGTCCCGTGATT
TGGCAGCACTGCATGAGATTTGTGTGGCCCATTCAGATGAACTGCGAACACTCAGTAATG
AGCGAGGTGCACAGCAGCATGTACTGAAAAAGCTCCTGGCTATAACAGAACTGCTTCAAC
AGAAACAAAACCAGTATACAAAAACTAATGATGTCAGGTAGCAGCCTTTACCTCAGTGTT
CTGCATGGATCCAGCATGCCCAACATGGTAATTCACATCAGTATAATGTTTCCTTTGCTC
TTGCCAAAAAATAGCACACCTTTCCACATTCCAGTGATGTGTGAGCTATGCAAACAAAAC
CCCAGATTCTGCTGGTGAGTAACCACACCAGCAGCTTTGTAAGCTATCTTGTGCAGGATT
ATTTGCACTTTTTCCATATAAGGAACCAATCTTTACCAACCTCTGAGCCTTGGTGTACAG
ATCACCTTTCACACAATGCTATGACTGTATCTTGAACTCTGAAAATATATTTTCAATACA
TCGAGTTGCCAAAGTTTTGCTGTCTCTTGAAAAAAGAACTATGAAATCAACTAAGAATAA
GCATTCTCTATTGACAACTGAGTATAACTGGATTGCAGACTGTTCTTACTGTTACTTCTT
CCTGAATTAGGAATATGACCGTTTGACTGTTCAATGACTTCATTTGTATTTACAGTTTCC
AGAGTCTCCCATTATAATAGGAACAATCTTTGCTGTATACTTTTTTAAAATAACTGTGCT
ACTTCTCTTTGCTGGAAGTGTTGAAAGAAAATATATAGAATGGAGATCTACTGCTCATCA
GCTTTATTTTTTACACATACCACTTATTTTGTTGGAATTGTCAAAGATTGTATTTAGCGT
TCATAATGCTTTTTTGTTAAATGTTTACAACAGTAAATAGTTTGAATTCAATAAATATTA
TTTGTCATTGTATACTGATCAATGCATGTTACCCAGTCAACCATTTTATACATTACCAAT
TTCTTTTGAGTTAAAAAAAACCCCTAGAATGCTTTTGTTGAAAGTATTCATTTATTAATT
CTAAGTTGCTTTTTAAATTATGCAAACAACCTCACCAACCACTTAAAACAGCTATCCATC
TTTGACCTTTCTGACTACTTGTTATCTGTTGGATATTTAGTTTGTATAGTTTTATTTGCT
TCTGTATGTGTATTTTTTTGTGAAGTATTCACAAGGGTTAAGTTAAAATAAAACCAAGGG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAGTCTGTGCAGAACTTAGCAAATCTGTGGAATTTGGAGCTAAGGAGCCTTACATGGAAG
GTGTCAATCCATTCATCAAAAGTAACAAGCATCGTATGATCATGTTTTTAGATGAGCTTG
GGAATGTACCTGAACTTCCGGACACTACAGAGCATTCTAGAACTGACCTGTCCCGTGATT
TGGCAGCACTGCATGAGATTTGTGTGGCCCATTCAGATGAACTGCGAACACTCAGTAATG
AGCGAGGTGCACAGCAGCATGTACTGAAAAAGCTCCTGGCTATAACAGAACTGCTTCAAC
AGAAACAAAACCAGTATACAAAAACTAATGATGTCAGGTAGCAGCCTTTACCTCAGTGTT
CTGCATGGATCCAGCATGCCCAACATGGTAATTCACATCAGTATAATGTTTCCTTTGCTC
TTGCCAAAAAATAGCACACCTTTCCACATTCCAGTGATGTGTGAGCTATGCAAACAAAAC
CCCAGATTCTGCTGGTGAGTAACCACACCAGCAGCTTTGTAAGCTATCTTGTGCAGGATT
ATTTGCACTTTTTCCATATAAGGAACCAATCTTTACCAACCTCTGAGCCTTGGTGTACAG
ATCACCTTTCACACAATGCTATGACTGTATCTTGAACTCTGAAAATATATTTTCAATACA
TCGAGTTGCCAAAGTTTTGCTGTCTCTTGAAAAAAGAACTATGAAATCAACTAAGAATAA
GCATTCTCTATTGACAACTGAGTATAACTGGATTGCAGACTGTTCTTACTGTTACTTCTT
CCTGAATTAGGAATATGACCGTTTGACTGTTCAATGACTTCATTTGTATTTACAGTTTCC
AGAGTCTCCCATTATAATAGGAACAATCTTTGCTGTATACTTTTTTAAAATAACTGTGCT
ACTTCTCTTTGCTGGAAGTGTTGAAAGAAAATATATAGAATGGAGATCTACTGCTCATCA
GCTTTATTTTTTACACATACCACTTATTTTGTTGGAATTGTCAAAGATTGTATTTAGCGT
TCATAATGCTTTTTTGTTAAATGTTTACAACAGTAAATAGTTTGAATTCAATAAATATTA
TTTGTCATTGTATACTGATCAATGCATGTTACCCAGTCAACCATTTTATACATTACCAAT
TTCTTTTGAGTTAAAAAAAACCCCTAGAATGCTTTTGTTGAAAGTATTCATTTATTAATT
CTAAGTTGCTTTTTAAATTATGCAAACAACCTCACCAACCACTTAAAACAGCTATCCATC
TTTGACCTTTCTGACTACTTGTTATCTGTTGGATATTTAGTTTGTATAGTTTTATTTGCT
TCTGTATGTGTATTTTTTTGTGAAGTATTCACAAGGGTTAAGTTAAAATAAAACCAAGGG |
|
104-257, gnl|bosTau2|chr7 (54217923-54217769) |
|
104-257, gnl|canFam2|chr3 (23953897-23953709) |
|
104-257, gnl|danRer3|chr5 (18907488-18907327) |
|
104-257, gnl|echTel1|scaffold_291743 (1648-1462) |
|
104-257, gnl|fr1|chrUn (116612243-116612410) |
|
104-257, gnl|galGal2|chrZ (31344801-31344976) |
|
104-257, gnl|hg17|chr5 (86720916-86721115) |
|
104-257, gnl|Hg17|chr5 (86720946-86721100) |
|
104-257, gnl|loxAfr1|scaffold_175924 (1445-1246) |
|
104-257, gnl|mm7|chr13 (82284638-82284455) |
|
104-257, gnl|Mm7|chr13 (82284617-82284463) |
|
104-257, gnl|monDom2|scaffold_20 (13430881-13430687) |
|
104-257, gnl|oryCun1|scaffold_201565 (11859-11687) |
|
104-257, gnl|panTro1|chr4 (28526681-28526482) |
|
104-257, gnl|rheMac2|chr6 (83636358-83636557) |
|
104-257, gnl|rn3|chr2 (14125332-14125149) |
|
104-257, gnl|tetNig1|chr12 (2384501-2384358) |
|
104-257, gnl|xenTro1|scaffold_362 (307291-307452) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
104-257, gnl|bosTau2|chr7 (54217923-54217769) |
|
104-257, gnl|canFam2|chr3 (23953897-23953709) |
|
104-257, gnl|danRer3|chr5 (18907488-18907327) |
|
104-257, gnl|echTel1|scaffold_291743 (1648-1462) |
|
104-257, gnl|fr1|chrUn (116612243-116612410) |
|
104-257, gnl|galGal2|chrZ (31344801-31344976) |
|
104-257, gnl|hg17|chr5 (86720916-86721115) |
|
104-257, gnl|Hg17|chr5 (86720946-86721100) |
|
104-257, gnl|loxAfr1|scaffold_175924 (1445-1246) |
|
104-257, gnl|mm7|chr13 (82284638-82284455) |
|
104-257, gnl|Mm7|chr13 (82284617-82284463) |
|
104-257, gnl|monDom2|scaffold_20 (13430881-13430687) |
|
104-257, gnl|oryCun1|scaffold_201565 (11859-11687) |
|
104-257, gnl|panTro1|chr4 (28526681-28526482) |
|
104-257, gnl|rheMac2|chr6 (83636358-83636557) |
|
104-257, gnl|rn3|chr2 (14125332-14125149) |
|
104-257, gnl|tetNig1|chr12 (2384501-2384358) |
|
104-257, gnl|xenTro1|scaffold_362 (307291-307452) |
|
fco (0.471624) |
|
liv (0.438853) |
|
amn (0.417711) |
|
tbr (0.308356) |
|
ret (0.257467) |
|
sin (0.174948) |
|
eli (0.151814) |
|
spl (0.143184) |
|
pla (0.133672) |
|
lyg (0.133103) |
|
kid (0.129735) |
|
ese (0.126502) |
|
pgl (0.118483) |
|
ldo (0.0970026) |
|
fco (0.471624) |
|
liv (0.438853) |
|
amn (0.417711) |
|
tbr (0.308356) |
|
ret (0.257467) |
|
sin (0.174948) |
|
eli (0.151814) |
|
spl (0.143184) |
|
pla (0.133672) |
|
lyg (0.133103) |
|
kid (0.129735) |
|
ese (0.126502) |
|
pgl (0.118483) |
|
ldo (0.0970026) |
