Ss1.1-Pig1-101O20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCGCCTCCCTCCCCACGCCGCCGTCCGCCCGGAGGAGGGGGCAGCCCCGTGAGCACCCC TGCGGTGCGAGAGTTGCACGAGGGTAGCAGGGTAGCGGCGCATCCTAGGCTCCGCGCCCC GCCCCTTCGAGCCCCCGGCCCCGCCTCCGTCTTCGCCCGCGCTCAGGACGGCTCTCCGAT TGGTCGGCGGCTCTCAGCCCCGCTCCGCCCCCTCCAAGGGAATAAAAGCCGCTGGCTCAG TGAGGTTCCCCTTGATAAACGCAGTCTGCATAGAGGCGCTAGCTGCTGCCGCTGTTCTGC CTCCCTGGGTTCTGCGGTGTCCCCAGGAGCCCGCCACCATCCTCTCCACGACGTGCTGCC CTGCATCAGCAGCCATGTGCCGGACCCTGGCTGCCTTCCCCACCACCTGCCTGGAGAGAG CCAAAGAGTTCAAGACCCGGCTGGGGATCTTTCTTCACAAGTCAGAGCTGGGCTCCGATC CCGCGAGTGTTGGCAAATTCGAGTGGGGCAGTAAACACAGCAAAGACGGCCGAAACTTCT CAGAAGACGTGCTGGGATGGAGAGAGTCATTTGACTTGTTGCTGAGCAGTAAAAATGGAG TGGCTGCCTTCCACACTTTCTTGAAGACGGAGTTCAGCGAAGAGAACCTGGAGTTCTGGT TGGCCTGTGAGGAGTTCAAGAAGCTCCGGTCAGCCACCAAGCTGGCATCCCGGGCACACA GGATCTTTGAGGAATTCATTCGCAGTGAAGCCCCTAAAGAGGTAAACCTAGACCATGAGA CCAGAGAGCTGACCAGGACGAACCTGCAGGCCGCCACGGCCACGTGCTTCGACGTGGCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCGCCTCCCTCCCCACGCCGCCGTCCGCCCGGAGGAGGGGGCAGCCCCGTGAGCACCCC TGCGGTGCGAGAGTTGCACGAGGGTAGCAGGGTAGCGGCGCATCCTAGGCTCCGCGCCCC GCCCCTTCGAGCCCCCGGCCCCGCCTCCGTCTTCGCCCGCGCTCAGGACGGCTCTCCGAT TGGTCGGCGGCTCTCAGCCCCGCTCCGCCCCCTCCAAGGGAATAAAAGCCGCTGGCTCAG TGAGGTTCCCCTTGATAAACGCAGTCTGCATAGAGGCGCTAGCTGCTGCCGCTGTTCTGC CTCCCTGGGTTCTGCGGTGTCCCCAGGAGCCCGCCACCATCCTCTCCACGACGTGCTGCC CTGCATCAGCAGCCATGTGCCGGACCCTGGCTGCCTTCCCCACCACCTGCCTGGAGAGAG CCAAAGAGTTCAAGACCCGGCTGGGGATCTTTCTTCACAAGTCAGAGCTGGGCTCCGATC CCGCGAGTGTTGGCAAATTCGAGTGGGGCAGTAAACACAGCAAAGACGGCCGAAACTTCT CAGAAGACGTGCTGGGATGGAGAGAGTCATTTGACTTGTTGCTGAGCAGTAAAAATGGAG TGGCTGCCTTCCACACTTTCTTGAAGACGGAGTTCAGCGAAGAGAACCTGGAGTTCTGGT TGGCCTGTGAGGAGTTCAAGAAGCTCCGGTCAGCCACCAAGCTGGCATCCCGGGCACACA GGATCTTTGAGGAATTCATTCGCAGTGAAGCCCCTAAAGAGGTAAACCTAGACCATGAGA CCAGAGAGCTGACCAGGACGAACCTGCAGGCCGCCACGGCCACGTGCTTCGACGTGGCTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 3-418, gnl|bosTau2|chr16 (46172805-46172413) | |
| 3-418, gnl|Hg17|chr1 (179305389-179305008) | |
| 3-418, gnl|Mm7|chr1 (153701116-153701492) | |
| 595-763, gnl|bosTau2|chr16 (46170317-46170149) | |
| 595-763, gnl|canFam2|chr7 (18973765-18973973) | |
| 595-763, gnl|danRer3|chrUn (14587000-14586801) | |
| 595-763, gnl|dasNov1|scaffold_540 (34512-34718) | |
| 595-763, gnl|echTel1|scaffold_301876 (136649-136441) | |
| 595-763, gnl|fr1|chrUn (46599412-46599202) | |
| 595-763, gnl|galGal2|chr8 (5623195-5622992) | |
| 595-763, gnl|hg17|chr1 (179302754-179302961) | |
| 595-763, gnl|Hg17|chr1 (179302924-179302756) | |
| 595-763, gnl|loxAfr1|scaffold_230299 (172-380) | |
| 595-763, gnl|mm7|chr1 (153703115-153702911) | |
| 595-763, gnl|Mm7|chr1 (153702943-153703111) | |
| 595-763, gnl|monDom2|scaffold_16 (36238460-36238670) | |
| 595-763, gnl|oryCun1|scaffold_204890 (14690-14900) | |
| 595-763, gnl|panTro1|chr1 (161711625-161711832) | |
| 595-763, gnl|rheMac2|chr1 (188057954-188057747) | |
| 595-763, gnl|rn3|chr13 (68823628-68823422) | |
| 595-763, gnl|tetNig1|chr15 (3409317-3409147) | |
| 595-763, gnl|xenTro1|scaffold_349 (558834-558633) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-418, gnl|bosTau2|chr16 (46172805-46172413) | |
| 3-418, gnl|Hg17|chr1 (179305389-179305008) | |
| 3-418, gnl|Mm7|chr1 (153701116-153701492) | |
| 595-763, gnl|bosTau2|chr16 (46170317-46170149) | |
| 595-763, gnl|canFam2|chr7 (18973765-18973973) | |
| 595-763, gnl|danRer3|chrUn (14587000-14586801) | |
| 595-763, gnl|dasNov1|scaffold_540 (34512-34718) | |
| 595-763, gnl|echTel1|scaffold_301876 (136649-136441) | |
| 595-763, gnl|fr1|chrUn (46599412-46599202) | |
| 595-763, gnl|galGal2|chr8 (5623195-5622992) | |
| 595-763, gnl|hg17|chr1 (179302754-179302961) | |
| 595-763, gnl|Hg17|chr1 (179302924-179302756) | |
| 595-763, gnl|loxAfr1|scaffold_230299 (172-380) | |
| 595-763, gnl|mm7|chr1 (153703115-153702911) | |
| 595-763, gnl|Mm7|chr1 (153702943-153703111) | |
| 595-763, gnl|monDom2|scaffold_16 (36238460-36238670) | |
| 595-763, gnl|oryCun1|scaffold_204890 (14690-14900) | |
| 595-763, gnl|panTro1|chr1 (161711625-161711832) | |
| 595-763, gnl|rheMac2|chr1 (188057954-188057747) | |
| 595-763, gnl|rn3|chr13 (68823628-68823422) | |
| 595-763, gnl|tetNig1|chr15 (3409317-3409147) | |
| 595-763, gnl|xenTro1|scaffold_349 (558834-558633) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ute (0.132784) |