Ss1.1-Pig1-107P04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGTCGGTACTGCCCGCGCGCGGAGACGGCGCCCCTCCTGGCCCCGGCTTCCTCGCTGTC AAACAGCCGCTGGAGCACCAGCCCTGGCCGGAGCCTGAGAGATCCTGAGCTGCCGCACAG GCTGGCACTGCCCGGAGAGGGGACCGCTTCGAGACTGCACCTCGCGACTTGAAGGCTCCC GGAATATTCTGCAGCCTGAGGATCTGATTCAACTTCGTGCCATAGGACATCTTCGTCTTT GCACTATACTGGGACCCTCACGAAATTTTTCAGTTGGAAAACTGTTGACAGCCAATCTTG CATCGAATCCTAGGCCCTTGCACTCTGAATTTACACTATTTGGGGAGCGTGCCCAAGGTT GAGATTGCACAAAGCACAGTTCAACTCTGCATCAGAGGGAAAGAGAACTTAGGCCAGCTG TGCATGGCCCAGGATTGGGAAGTGATGGATTCCTGAAGTGGAAGAGGTGGTGCAGAGGGG GCACCGCCCATGCTGCCCTGCTTCCAGCTGCTGCGCATAGGGGGCGGCAGGGGTGTCGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGTCGGTACTGCCCGCGCGCGGAGACGGCGCCCCTCCTGGCCCCGGCTTCCTCGCTGTC AAACAGCCGCTGGAGCACCAGCCCTGGCCGGAGCCTGAGAGATCCTGAGCTGCCGCACAG GCTGGCACTGCCCGGAGAGGGGACCGCTTCGAGACTGCACCTCGCGACTTGAAGGCTCCC GGAATATTCTGCAGCCTGAGGATCTGATTCAACTTCGTGCCATAGGACATCTTCGTCTTT GCACTATACTGGGACCCTCACGAAATTTTTCAGTTGGAAAACTGTTGACAGCCAATCTTG CATCGAATCCTAGGCCCTTGCACTCTGAATTTACACTATTTGGGGAGCGTGCCCAAGGTT GAGATTGCACAAAGCACAGTTCAACTCTGCATCAGAGGGAAAGAGAACTTAGGCCAGCTG TGCATGGCCCAGGATTGGGAAGTGATGGATTCCTGAAGTGGAAGAGGTGGTGCAGAGGGG GCACCGCCCATGCTGCCCTGCTTCCAGCTGCTGCGCATAGGGGGCGGCAGGGGTGTCGAC |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 1-166, gnl|bosTau2|chr23 (20488705-20488540) | |
| 1-166, gnl|canFam2|chr12 (3858593-3859283) | |
| 1-166, gnl|echTel1|scaffold_297254 (6793-6066) | |
| 1-166, gnl|hg17|chr6 (31234150-31234900) | |
| 1-166, gnl|Hg17|chr6 (31234308-31234478) | |
| 1-166, gnl|loxAfr1|scaffold_20189 (29654-28924) | |
| 1-166, gnl|mm7|chr17 (33618783-33618190) | |
| 1-166, gnl|monDom2|scaffold_42 (18158337-18157534) | |
| 1-166, gnl|oryCun1|scaffold_99612 (6605-7349) | |
| 1-166, gnl|panTro1|chr5 (31699613-31700359) | |
| 1-166, gnl|rheMac2|chr4 (30727322-30728072) | |
| 169-539, gnl|bosTau2|chr23 (20488109-20487735) | |
| 169-539, gnl|canFam2|chr12 (3859286-3859657) | |
| 169-539, gnl|echTel1|scaffold_297254 (6063-5790) | |
| 169-539, gnl|hg17|chr6 (31234901-31235222) | |
| 169-539, gnl|Hg17|chr6 (31234900-31235275) | |
| 169-539, gnl|loxAfr1|scaffold_20189 (28921-28621) | |
| 169-539, gnl|mm7|chr17 (33618184-33617878) | |
| 169-539, gnl|Mm7|chr17 (33618186-33617823) | |
| 169-539, gnl|monDom2|scaffold_42 (18157531-18157187) | |
| 169-539, gnl|oryCun1|scaffold_99612 (7352-7688) | |
| 169-539, gnl|panTro1|chr5 (31700360-31700681) | |
| 169-539, gnl|rheMac2|chr4 (30728073-30728397) | |
| 169-539, gnl|rn3|chr9 (64331007-64331288) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-166, gnl|bosTau2|chr23 (20488705-20488540) | |
| 1-166, gnl|canFam2|chr12 (3858593-3859283) | |
| 1-166, gnl|echTel1|scaffold_297254 (6793-6066) | |
| 1-166, gnl|hg17|chr6 (31234150-31234900) | |
| 1-166, gnl|Hg17|chr6 (31234308-31234478) | |
| 1-166, gnl|loxAfr1|scaffold_20189 (29654-28924) | |
| 1-166, gnl|mm7|chr17 (33618783-33618190) | |
| 1-166, gnl|monDom2|scaffold_42 (18158337-18157534) | |
| 1-166, gnl|oryCun1|scaffold_99612 (6605-7349) | |
| 1-166, gnl|panTro1|chr5 (31699613-31700359) | |
| 1-166, gnl|rheMac2|chr4 (30727322-30728072) | |
| 169-539, gnl|bosTau2|chr23 (20488109-20487735) | |
| 169-539, gnl|canFam2|chr12 (3859286-3859657) | |
| 169-539, gnl|echTel1|scaffold_297254 (6063-5790) | |
| 169-539, gnl|hg17|chr6 (31234901-31235222) | |
| 169-539, gnl|Hg17|chr6 (31234900-31235275) | |
| 169-539, gnl|loxAfr1|scaffold_20189 (28921-28621) | |
| 169-539, gnl|mm7|chr17 (33618184-33617878) | |
| 169-539, gnl|Mm7|chr17 (33618186-33617823) | |
| 169-539, gnl|monDom2|scaffold_42 (18157531-18157187) | |
| 169-539, gnl|oryCun1|scaffold_99612 (7352-7688) | |
| 169-539, gnl|panTro1|chr5 (31700360-31700681) | |
| 169-539, gnl|rheMac2|chr4 (30728073-30728397) | |
| 169-539, gnl|rn3|chr9 (64331007-64331288) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.191681) |