Non-Coding RNA Search

Ss1.1-Pig1-108O11.5

Sequence:


               
               AAAGAACGTTAAGGCTGAGTTGAGAGTGGTTGCTGTTTTCTGCACAGGCATCGTCAATGA
TCGTTTTTGAGACTCTTCTGCTTGCAACGAGATGGGCTTGAGAGGAAAGAACTCTACCAA
GGCCTGAAACCTCCAAGAGACGCTGAGGGAGGAAGCCCACCAAGGCTCACTGGAACACTT
TTCTTCACCACTGGATCTCTCGGTTAATGACAAATGGACACAGAAGGTAGGAGCAGAACA
GATCTTGCTCTTCCAGAACCACAAAGGCCCTCCAGTGCATCTGAAATTGAACTATCAGAA
GTACCTCTCCATGAGAACGTCTTACAGGAGGAGGATACCCCACCCCCACCACGCCGTACA
TGGCTGACTTTTTTGAAGAAGGAGCTGGAATTCCTGGGGGTAACACAAATTTTGGTTGGT
TTGATATGCCTTTATTTTGGAACGATTGTCTGCTCCATGCTCAATATTTCAGAATTTAAA
GAAGACTTTNTTTCATCATTTAAAGCAGGCTACCCATTCTGGGGAGCAGCATTGTTTGGT
ATTTCTGGATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGAACGTTAAGGCTGAGTTGAGAGTGGTTGCTGTTTTCTGCACAGGCATCGTCAATGA
TCGTTTTTGAGACTCTTCTGCTTGCAACGAGATGGGCTTGAGAGGAAAGAACTCTACCAA
GGCCTGAAACCTCCAAGAGACGCTGAGGGAGGAAGCCCACCAAGGCTCACTGGAACACTT
TTCTTCACCACTGGATCTCTCGGTTAATGACAAATGGACACAGAAGGTAGGAGCAGAACA
GATCTTGCTCTTCCAGAACCACAAAGGCCCTCCAGTGCATCTGAAATTGAACTATCAGAA
GTACCTCTCCATGAGAACGTCTTACAGGAGGAGGATACCCCACCCCCACCACGCCGTACA
TGGCTGACTTTTTTGAAGAAGGAGCTGGAATTCCTGGGGGTAACACAAATTTTGGTTGGT
TTGATATGCCTTTATTTTGGAACGATTGTCTGCTCCATGCTCAATATTTCAGAATTTAAA
GAAGACTTTNTTTCATCATTTAAAGCAGGCTACCCATTCTGGGGAGCAGCATTGTTTGGT
ATTTCTGGATTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               399-542, gnl|bosTau2|chr15 (52145586-52145443)
               

               
               399-542, gnl|Hg17|chr11 (59614384-59614527)
               

               
               399-542, gnl|Mm7|chr19 (11302301-11302158)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               399-542, gnl|bosTau2|chr15 (52145586-52145443)
               

               
               399-542, gnl|Hg17|chr11 (59614384-59614527)
               

               
               399-542, gnl|Mm7|chr19 (11302301-11302158)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	399-542, gnl\|bosTau2\|chr15 (52145586-52145443)
	399-542, gnl\|Hg17\|chr11 (59614384-59614527)
	399-542, gnl\|Mm7\|chr19 (11302301-11302158)