Ss1.1-Pig1-111H17.5
|
AAGAGGCGGAACACCGGGCGGTTTGAAAGCCCGGCGCGCACCGCGGGAGCGGCGGTTCGC
CTGTCATTGCGATGTCGGTGTTGCGGCCGATGGACAAGCTGCCGGGCCTGAACACGGCCA
CCATATTGCTGGTGGGCACAGAGGATGCTCTTCTGCAGCAGCTGGCCGATTCGATGCTCA
AGGAGGACTGTGCCTCGGAGCTGAAGGTCCACTTGGCAAATTCCCTCCCCCTGCCCTCCA
GCGTGACTCGGCCCCGGATTGACTTGATTGTGTTTGTCATCAACCTGCACAGCAAGCACA
GCCTCCGGAATGTAGAGGAGTCCCTGCACCACGTGGACGCCACCTTCTTCCTAGGGAAGG
TCAGCTTCCTTGTCACCGGCGCCGGGCGGGAGAGCCACTGCAGCATTCACCGCAGCACGG
TCGTGAAGCTGGCCCACACCTACCGGAGCCCCCTGCTCTTCTGTGACCTGGAGATAGAAG
ACTTCCGAGCCACCATGGCACAGCGCCTGGTCCGCATGCTGCAGATCTGCGCCGGCCACG
TGCCGGGCGTCTCGGCCCTGAACCTGCTGTCCCTGCTGAGGAGCTCCGAGAACCCCTCCC
TGGAGGACCTGTGAGGGCCACCACCCTCGGGCCGCCCCTCCCCATCGCTTGGTCCGGCTC
AGTAAACATTCACTGCTGCCGAAGACCAGCCAGGGCTTGAGAGACCCAGGTCACAGGCAG
TCCCCTCAGGGCCCGGGGTCTCTGCGCTCCAGCTCCAGTGGGAGAACTGAGGTTGTGGGG
GTGGGGGGGAGCCCAGCTGGCAGCACTCCAGCCGCCCATCCCATCCTCACCCCAGCAGAG
CCCCGGGTCCTCGTCCACCTGACGTGTTACATCTCTGCTTAAGACTTCATCTGAGCAAAG
GATCTGTGGCTAAAAAAAGTTTGGAAATCACTGGTCTCATCCACCACTTTGATTCTGCAA
ATGAGAAAACTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAGAGGCGGAACACCGGGCGGTTTGAAAGCCCGGCGCGCACCGCGGGAGCGGCGGTTCGC
CTGTCATTGCGATGTCGGTGTTGCGGCCGATGGACAAGCTGCCGGGCCTGAACACGGCCA
CCATATTGCTGGTGGGCACAGAGGATGCTCTTCTGCAGCAGCTGGCCGATTCGATGCTCA
AGGAGGACTGTGCCTCGGAGCTGAAGGTCCACTTGGCAAATTCCCTCCCCCTGCCCTCCA
GCGTGACTCGGCCCCGGATTGACTTGATTGTGTTTGTCATCAACCTGCACAGCAAGCACA
GCCTCCGGAATGTAGAGGAGTCCCTGCACCACGTGGACGCCACCTTCTTCCTAGGGAAGG
TCAGCTTCCTTGTCACCGGCGCCGGGCGGGAGAGCCACTGCAGCATTCACCGCAGCACGG
TCGTGAAGCTGGCCCACACCTACCGGAGCCCCCTGCTCTTCTGTGACCTGGAGATAGAAG
ACTTCCGAGCCACCATGGCACAGCGCCTGGTCCGCATGCTGCAGATCTGCGCCGGCCACG
TGCCGGGCGTCTCGGCCCTGAACCTGCTGTCCCTGCTGAGGAGCTCCGAGAACCCCTCCC
TGGAGGACCTGTGAGGGCCACCACCCTCGGGCCGCCCCTCCCCATCGCTTGGTCCGGCTC
AGTAAACATTCACTGCTGCCGAAGACCAGCCAGGGCTTGAGAGACCCAGGTCACAGGCAG
TCCCCTCAGGGCCCGGGGTCTCTGCGCTCCAGCTCCAGTGGGAGAACTGAGGTTGTGGGG
GTGGGGGGGAGCCCAGCTGGCAGCACTCCAGCCGCCCATCCCATCCTCACCCCAGCAGAG
CCCCGGGTCCTCGTCCACCTGACGTGTTACATCTCTGCTTAAGACTTCATCTGAGCAAAG
GATCTGTGGCTAAAAAAAGTTTGGAAATCACTGGTCTCATCCACCACTTTGATTCTGCAA
ATGAGAAAACTG
|
|
gi|50845414|ref|NP_001002876.1| |
Protein identifier
|
gi|50845414|ref|NP_001002876.1| |
|
1-128, gnl|bosTau2|chr5 (70464614-70464485) |
|
1-128, gnl|canFam2|chr10 (26477195-26476956) |
|
1-128, gnl|dasNov1|scaffold_189597 (1029-791) |
|
1-128, gnl|echTel1|scaffold_192270 (306-84) |
|
1-128, gnl|hg17|chr22 (40667502-40667744) |
|
1-128, gnl|Hg17|chr22 (40667652-40667524) |
|
1-128, gnl|mm7|chr15 (82329000-82329217) |
|
1-128, gnl|Mm7|chr15 (82329141-82329018) |
|
1-128, gnl|oryCun1|scaffold_181385 (22646-22877) |
|
1-128, gnl|panTro1|chr23 (40937209-40937451) |
|
1-128, gnl|rheMac2|chr10 (85907466-85907708) |
|
1-128, gnl|rn3|chr7 (120653388-120653602) |
| |
|
468-972, gnl|bosTau2|chr5 (70453234-70452744) |
|
468-972, gnl|Hg17|chr22 (40659705-40659199) |
|
468-972, gnl|Mm7|chr15 (82318910-82318449) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-128, gnl|bosTau2|chr5 (70464614-70464485) |
|
1-128, gnl|canFam2|chr10 (26477195-26476956) |
|
1-128, gnl|dasNov1|scaffold_189597 (1029-791) |
|
1-128, gnl|echTel1|scaffold_192270 (306-84) |
|
1-128, gnl|hg17|chr22 (40667502-40667744) |
|
1-128, gnl|Hg17|chr22 (40667652-40667524) |
|
1-128, gnl|mm7|chr15 (82329000-82329217) |
|
1-128, gnl|Mm7|chr15 (82329141-82329018) |
|
1-128, gnl|oryCun1|scaffold_181385 (22646-22877) |
|
1-128, gnl|panTro1|chr23 (40937209-40937451) |
|
1-128, gnl|rheMac2|chr10 (85907466-85907708) |
|
1-128, gnl|rn3|chr7 (120653388-120653602) |
| |
|
468-972, gnl|bosTau2|chr5 (70453234-70452744) |
|
468-972, gnl|Hg17|chr22 (40659705-40659199) |
|
468-972, gnl|Mm7|chr15 (82318910-82318449) |
|
fty (0.17584) |
|
nje (0.16592) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
ese (0.126502) |
|
ebs (0.118301) |
|
nbm (0.0993246) |
|
fty (0.17584) |
|
nje (0.16592) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
ese (0.126502) |
|
ebs (0.118301) |
|
nbm (0.0993246) |
