Non-Coding RNA Search

Ss1.1-Pig1-112F17.5

Sequence:


               
               CTGTGTCGCCCAACAGCAAGCCCAAGCTGAACACTGGGCAGATCCAGGAGTCCATCGGCG
AGGCCGTCAATGGCATCGTGAAGCACTTCCATAAGCCCGAGAAAGAGCGGGGGAGTCTGA
CGCTGTTGCTCTGTGGGGAATGTGGCCTCGTCTCAGCCCTGGAGCAGGCTTTCCAGCATG
GGTTCAAATCGCCACGGCTCTTCAAGAATGTCTTCATCTGGGATTTCCTGGAAAAGGCAC
AGACCTACTATGAGACTTTGGAGCAGAACGAACTGGTCCCAGAGGAGAACTGGCACACGA
GGGCCCGGAGCTTCTGCCGCTTTGTCACCGCCATCAACAGCACCCCGAGGAACATCGGCA
AGGACGGCAAGTTTCAGATGCTGGTGTGCCTGGGAGCCAGGGATCACCTCCTGCACCACT
GGATCGCCCTGCTGGCTGACTGCCCCATCACGGCACACATGTATGAGGACGTGGCGCTCA
TCAAAGACCACACGCTTGTCAATTCCTTGATCCGCGTGCTGCAGACCCTGCAGGAGTTCA
ACATCACGCTGGAGACGTCCTTGGTCAAGGGCATCGATATCTGACTGCCGGCGCTGCCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGTGTCGCCCAACAGCAAGCCCAAGCTGAACACTGGGCAGATCCAGGAGTCCATCGGCG
AGGCCGTCAATGGCATCGTGAAGCACTTCCATAAGCCCGAGAAAGAGCGGGGGAGTCTGA
CGCTGTTGCTCTGTGGGGAATGTGGCCTCGTCTCAGCCCTGGAGCAGGCTTTCCAGCATG
GGTTCAAATCGCCACGGCTCTTCAAGAATGTCTTCATCTGGGATTTCCTGGAAAAGGCAC
AGACCTACTATGAGACTTTGGAGCAGAACGAACTGGTCCCAGAGGAGAACTGGCACACGA
GGGCCCGGAGCTTCTGCCGCTTTGTCACCGCCATCAACAGCACCCCGAGGAACATCGGCA
AGGACGGCAAGTTTCAGATGCTGGTGTGCCTGGGAGCCAGGGATCACCTCCTGCACCACT
GGATCGCCCTGCTGGCTGACTGCCCCATCACGGCACACATGTATGAGGACGTGGCGCTCA
TCAAAGACCACACGCTTGTCAATTCCTTGATCCGCGTGCTGCAGACCCTGCAGGAGTTCA
ACATCACGCTGGAGACGTCCTTGGTCAAGGGCATCGATATCTGACTGCCGGCGCTGCCGG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               231-401, gnl|bosTau2|chr15 (30652825-30652655)
               

               
               231-401, gnl|Hg17|chr11 (9120232-9120062)
               

               
               231-401, gnl|Mm7|chr7 (105811683-105811513)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               231-401, gnl|bosTau2|chr15 (30652825-30652655)
               

               
               231-401, gnl|Hg17|chr11 (9120232-9120062)
               

               
               231-401, gnl|Mm7|chr7 (105811683-105811513)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               mcp (0.170648)
               

               
               hyp (0.142837)
               

               
               pla (0.133672)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)
               

               
               hyp (0.142837)
               

               
               pla (0.133672)

	231-401, gnl\|bosTau2\|chr15 (30652825-30652655)
	231-401, gnl\|Hg17\|chr11 (9120232-9120062)
	231-401, gnl\|Mm7\|chr7 (105811683-105811513)