Ss1.1-Pig1-112H22.5
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GGCATTTGCAAAGCATCCTGGCGACTGACCTGCACTGGGCCTGAGCCCCCTGCCCTGCGT
GGAAGGGCAGCTGCTGGCCTCCTCTATGGCTCGCCATCTTGGTGACCTTAGGAAACTCAG
TTAAGGTCTCTGTGCCTTGATTTCTTTATCTGTAAAATGGGGATAATGACTCACCCTTCC
CAGGGGCGTTGTAAGATGTAAATGCAAAATCCTTGCGACATGCTTAGAACAGTGCCCGGC
ACATAGCAAGCCCTCCGTGTGAACTAATTTATTTTCTAGGATGGTTTTAGTAGGTATTCT
GGATTTTTTTTTTTTTTTTTTTTTTGGCAATGATTCATCACATACTCAGAGATCATTTTT
AAAGCCACCATTCAGGCTCCTTCCCTAACGTGTGTCCCCTGGAACCCTGGGGGCGTGAGA
TGCTCCATTGGAAAAGAAGGGATGGGGTTCGTGGTCAAAGAGGTTTGGAAAACTTCTCTG
GACTCAGCCCGAGGCAGCATGTACAGATCCTGGCCACCGAGGCAGAGTTGCAGGTGTCAG
TGGCTTTGCAATAACAGGATCATGAGTTTCTAGAGATACCCACCCCCCGGGGTGGGGGTA
GGGGGCAAGCTACGCAGGAAGCCAAGTGGAAACCAATAGCTGCTGAGCTGGTCGCCGGTG
TCCCCTGCATTCCTCCTGCGGGAACCTTCCAGCCGTTCCCCAGAGGTACCCAGCGTTCCC
ACAGGGCTGCCTGGCCGTGATTTGTCTGGCGATGCCAGGAGTGGCTCCTGAGCCTGCTGG
GAATGGCCAAAGGGTCTGAAGACATGAGAGCCACGCCGCGTGGGAAAGTGACAGCTGCAC
CTGCCCCTTAAGGAGTCATCCAGCCACAAGTCACCTCCCAAAGCCACCACTGAGAGAGCC
ACAGGTGGATCCTTACTGCAAGCCATAGTCAAGCCGTCCAATAACAGCTTATGTCGAGAT
GGTGGACTTCAGCTCCAGGCAATGGGGTTCACTTTGCCGCTGGAGAGAGACAGTGACCAC
GCCTGTAACCTGCAAGGAACATGTTTCTAAAACAACAGAACAACAGGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGCATTTGCAAAGCATCCTGGCGACTGACCTGCACTGGGCCTGAGCCCCCTGCCCTGCGT
GGAAGGGCAGCTGCTGGCCTCCTCTATGGCTCGCCATCTTGGTGACCTTAGGAAACTCAG
TTAAGGTCTCTGTGCCTTGATTTCTTTATCTGTAAAATGGGGATAATGACTCACCCTTCC
CAGGGGCGTTGTAAGATGTAAATGCAAAATCCTTGCGACATGCTTAGAACAGTGCCCGGC
ACATAGCAAGCCCTCCGTGTGAACTAATTTATTTTCTAGGATGGTTTTAGTAGGTATTCT
GGATTTTTTTTTTTTTTTTTTTTTTGGCAATGATTCATCACATACTCAGAGATCATTTTT
AAAGCCACCATTCAGGCTCCTTCCCTAACGTGTGTCCCCTGGAACCCTGGGGGCGTGAGA
TGCTCCATTGGAAAAGAAGGGATGGGGTTCGTGGTCAAAGAGGTTTGGAAAACTTCTCTG
GACTCAGCCCGAGGCAGCATGTACAGATCCTGGCCACCGAGGCAGAGTTGCAGGTGTCAG
TGGCTTTGCAATAACAGGATCATGAGTTTCTAGAGATACCCACCCCCCGGGGTGGGGGTA
GGGGGCAAGCTACGCAGGAAGCCAAGTGGAAACCAATAGCTGCTGAGCTGGTCGCCGGTG
TCCCCTGCATTCCTCCTGCGGGAACCTTCCAGCCGTTCCCCAGAGGTACCCAGCGTTCCC
ACAGGGCTGCCTGGCCGTGATTTGTCTGGCGATGCCAGGAGTGGCTCCTGAGCCTGCTGG
GAATGGCCAAAGGGTCTGAAGACATGAGAGCCACGCCGCGTGGGAAAGTGACAGCTGCAC
CTGCCCCTTAAGGAGTCATCCAGCCACAAGTCACCTCCCAAAGCCACCACTGAGAGAGCC
ACAGGTGGATCCTTACTGCAAGCCATAGTCAAGCCGTCCAATAACAGCTTATGTCGAGAT
GGTGGACTTCAGCTCCAGGCAATGGGGTTCACTTTGCCGCTGGAGAGAGACAGTGACCAC
GCCTGTAACCTGCAAGGAACATGTTTCTAAAACAACAGAACAACAGGG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
75-307, gnl|bosTau2|chr16 (21600764-21600538) |
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75-307, gnl|Hg17|chr1 (11717774-11718323) |
| |
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315-886, gnl|bosTau2|chr16 (21600548-21599984) |
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315-886, gnl|Hg17|chr1 (11718314-11718875) |
| |
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916-1065, gnl|bosTau2|chr16 (21599760-21599621) |
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916-1065, gnl|canFam2|chr2 (87397388-87396978) |
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916-1065, gnl|dasNov1|scaffold_208940 (1172-750) |
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916-1065, gnl|hg17|chr1 (11718916-11719376) |
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916-1065, gnl|Hg17|chr1 (11718916-11719059) |
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916-1065, gnl|loxAfr1|scaffold_46106 (16616-17196) |
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916-1065, gnl|mm7|chr4 (147089180-147088746) |
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916-1065, gnl|panTro1|chr1 (11934922-11935382) |
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916-1065, gnl|rheMac2|chr1 (14821291-14821720) |
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916-1065, gnl|rn3|chr5 (165187164-165186745) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
75-307, gnl|bosTau2|chr16 (21600764-21600538) |
|
75-307, gnl|Hg17|chr1 (11717774-11718323) |
| |
|
315-886, gnl|bosTau2|chr16 (21600548-21599984) |
|
315-886, gnl|Hg17|chr1 (11718314-11718875) |
| |
|
916-1065, gnl|bosTau2|chr16 (21599760-21599621) |
|
916-1065, gnl|canFam2|chr2 (87397388-87396978) |
|
916-1065, gnl|dasNov1|scaffold_208940 (1172-750) |
|
916-1065, gnl|hg17|chr1 (11718916-11719376) |
|
916-1065, gnl|Hg17|chr1 (11718916-11719059) |
|
916-1065, gnl|loxAfr1|scaffold_46106 (16616-17196) |
|
916-1065, gnl|mm7|chr4 (147089180-147088746) |
|
916-1065, gnl|panTro1|chr1 (11934922-11935382) |
|
916-1065, gnl|rheMac2|chr1 (14821291-14821720) |
|
916-1065, gnl|rn3|chr5 (165187164-165186745) |
