Ss1.1-Pig1-112K22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACCCGTTCCTGCAGCTTCCGAAGCTGCTCCTGGGAGATGGCACTGTCTGCCTTCGCGTG GCTCTCCCGCGTCTGAGCTGTCTTCTCCTCCTTCCGGGCCGTGTGGTAGCTCTTCTTGGA AGCCTCGACCTCCTTCAGCCTCTTTAGCCAGGGCTTCTGGGCCTTGCGGAAGCCGTCCTC GGCTGCCCGGCTCTCTCGGAAGCCACCCAGCACAGGCCGGTGAAAGGCCCCCCGCTGCCA GGCACGCACCCGCTCGCTGTCCTGGCCCTGCAGCTTCTCCCGCACCTCCAAGTGCAGTGC GCTCAGCCGCTCAGCCGCCGTGAAGAAGGCATGCCAGGCCTTCTCCAGCGTGCCATACTG GGGACCCTTCTCCACGGCGCCCCTCCACTTGCGGGCCCAGTCAGCCAGCTGCTGGGCATA GGCCTTCTCGATGCGGGCACGCTCCTGGAAGCAGCTGACCAGGTCCCCGCACAGCCGGTG CCCATCCTCCACCCGCTGCACCGTCCGCCTGTAGTTGCCAGCCTCCCAGAAACTACCCTC TATGGCCTCCCCTCCAGCGTCTTCCTCTGGAGCCATGGCGTCCCCGCAGCACGGAATGGT GGCGGATTGTGGCTGAGTAGTGGAGGGCGCCTCGGCCGCTCACAGGGTGTGTACGCAGCA GAACGTAGCTTCTGAAACAAGTTTCAACACCCACTCTCTCTGTTGGGACTTGGACAAGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACCCGTTCCTGCAGCTTCCGAAGCTGCTCCTGGGAGATGGCACTGTCTGCCTTCGCGTG GCTCTCCCGCGTCTGAGCTGTCTTCTCCTCCTTCCGGGCCGTGTGGTAGCTCTTCTTGGA AGCCTCGACCTCCTTCAGCCTCTTTAGCCAGGGCTTCTGGGCCTTGCGGAAGCCGTCCTC GGCTGCCCGGCTCTCTCGGAAGCCACCCAGCACAGGCCGGTGAAAGGCCCCCCGCTGCCA GGCACGCACCCGCTCGCTGTCCTGGCCCTGCAGCTTCTCCCGCACCTCCAAGTGCAGTGC GCTCAGCCGCTCAGCCGCCGTGAAGAAGGCATGCCAGGCCTTCTCCAGCGTGCCATACTG GGGACCCTTCTCCACGGCGCCCCTCCACTTGCGGGCCCAGTCAGCCAGCTGCTGGGCATA GGCCTTCTCGATGCGGGCACGCTCCTGGAAGCAGCTGACCAGGTCCCCGCACAGCCGGTG CCCATCCTCCACCCGCTGCACCGTCCGCCTGTAGTTGCCAGCCTCCCAGAAACTACCCTC TATGGCCTCCCCTCCAGCGTCTTCCTCTGGAGCCATGGCGTCCCCGCAGCACGGAATGGT GGCGGATTGTGGCTGAGTAGTGGAGGGCGCCTCGGCCGCTCACAGGGTGTGTACGCAGCA GAACGTAGCTTCTGAAACAAGTTTCAACACCCACTCTCTCTGTTGGGACTTGGACAAGTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 128-366, gnl|bosTau2|chr15 (49097155-49096917) | |
| 128-366, gnl|canFam2|chr18 (45430039-45429781) | |
| 128-366, gnl|danRer3|chrNA (12792138-12792382) | |
| 128-366, gnl|dasNov1|scaffold_102936 (4723-4473) | |
| 128-366, gnl|echTel1|scaffold_168109 (1863-1604) | |
| 128-366, gnl|fr1|chrUn (101760931-101761192) | |
| 128-366, gnl|galGal2|chr5 (20473957-20473703) | |
| 128-366, gnl|hg17|chr11 (47158579-47158838) | |
| 128-366, gnl|Hg17|chr11 (47158580-47158818) | |
| 128-366, gnl|loxAfr1|scaffold_19545 (14087-14346) | |
| 128-366, gnl|mm7|chr2 (91112127-91111871) | |
| 128-366, gnl|Mm7|chr2 (91112124-91111886) | |
| 128-366, gnl|monDom2|scaffold_33 (13071201-13071462) | |
| 128-366, gnl|oryCun1|scaffold_192658 (2119-2382) | |
| 128-366, gnl|panTro1|chr9 (47676129-47676388) | |
| 128-366, gnl|rheMac2|chr14 (24942520-24942261) | |
| 128-366, gnl|rn3|chr3 (75512450-75512191) | |
| 128-366, gnl|tetNig1|chr19 (1658006-1657758) | |
| 128-366, gnl|xenTro1|scaffold_1116 (198849-199090) | |
| 513-615, gnl|bosTau2|chr15 (49095456-49095354) | |
| 513-615, gnl|canFam2|chr18 (45428770-45428657) | |
| 513-615, gnl|danRer3|chrNA (219729111-219728992) | |
| 513-615, gnl|fr1|chrUn (101761483-101761607) | |
| 513-615, gnl|galGal2|chr5 (20472810-20472733) | |
| 513-615, gnl|hg17|chr11 (47160792-47160906) | |
| 513-615, gnl|Hg17|chr11 (47160791-47160894) | |
| 513-615, gnl|loxAfr1|scaffold_19545 (15796-15910) | |
| 513-615, gnl|mm7|chr2 (91110988-91110874) | |
| 513-615, gnl|Mm7|chr2 (91110987-91110884) | |
| 513-615, gnl|monDom2|scaffold_33 (13071924-13072068) | |
| 513-615, gnl|oryCun1|scaffold_200186 (346275-346161) | |
| 513-615, gnl|panTro1|chr9 (47678338-47678452) | |
| 513-615, gnl|rheMac2|chr14 (24940382-24940268) | |
| 513-615, gnl|rn3|chr3 (75511319-75511205) | |
| 513-615, gnl|xenTro1|scaffold_1009 (53463-53342) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 128-366, gnl|bosTau2|chr15 (49097155-49096917) | |
| 128-366, gnl|canFam2|chr18 (45430039-45429781) | |
| 128-366, gnl|danRer3|chrNA (12792138-12792382) | |
| 128-366, gnl|dasNov1|scaffold_102936 (4723-4473) | |
| 128-366, gnl|echTel1|scaffold_168109 (1863-1604) | |
| 128-366, gnl|fr1|chrUn (101760931-101761192) | |
| 128-366, gnl|galGal2|chr5 (20473957-20473703) | |
| 128-366, gnl|hg17|chr11 (47158579-47158838) | |
| 128-366, gnl|Hg17|chr11 (47158580-47158818) | |
| 128-366, gnl|loxAfr1|scaffold_19545 (14087-14346) | |
| 128-366, gnl|mm7|chr2 (91112127-91111871) | |
| 128-366, gnl|Mm7|chr2 (91112124-91111886) | |
| 128-366, gnl|monDom2|scaffold_33 (13071201-13071462) | |
| 128-366, gnl|oryCun1|scaffold_192658 (2119-2382) | |
| 128-366, gnl|panTro1|chr9 (47676129-47676388) | |
| 128-366, gnl|rheMac2|chr14 (24942520-24942261) | |
| 128-366, gnl|rn3|chr3 (75512450-75512191) | |
| 128-366, gnl|tetNig1|chr19 (1658006-1657758) | |
| 128-366, gnl|xenTro1|scaffold_1116 (198849-199090) | |
| 513-615, gnl|bosTau2|chr15 (49095456-49095354) | |
| 513-615, gnl|canFam2|chr18 (45428770-45428657) | |
| 513-615, gnl|danRer3|chrNA (219729111-219728992) | |
| 513-615, gnl|fr1|chrUn (101761483-101761607) | |
| 513-615, gnl|galGal2|chr5 (20472810-20472733) | |
| 513-615, gnl|hg17|chr11 (47160792-47160906) | |
| 513-615, gnl|Hg17|chr11 (47160791-47160894) | |
| 513-615, gnl|loxAfr1|scaffold_19545 (15796-15910) | |
| 513-615, gnl|mm7|chr2 (91110988-91110874) | |
| 513-615, gnl|Mm7|chr2 (91110987-91110884) | |
| 513-615, gnl|monDom2|scaffold_33 (13071924-13072068) | |
| 513-615, gnl|oryCun1|scaffold_200186 (346275-346161) | |
| 513-615, gnl|panTro1|chr9 (47678338-47678452) | |
| 513-615, gnl|rheMac2|chr14 (24940382-24940268) | |
| 513-615, gnl|rn3|chr3 (75511319-75511205) | |
| 513-615, gnl|xenTro1|scaffold_1009 (53463-53342) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) |