Non-Coding RNA Search

Ss1.1-Pig1-113C03.5

Sequence:


               
               AGTGAGACCTTG------------------------------------------------
------------------------------------CAAGAAGACAAATCAGATGGCAGA
GTGGTGGGAGGAGATGCAGCCTGATGCTTTAAAGCTTGAGCAAGAATCTTCATCTCTCTG
GGCCTCAGTTCTCTCCCCTATCAAGTGAGGAATTTATGCTGGGATTAACATCTAACAACT
ATGGAATGCCTTTCACATGGCAGGCTCTGTGCTGTGAACTTTCTATGCTTTCTATTTAGC
CCTCCTTACAGTCTTCAGAGGTAAGTGCTATGGTTATTCCCATTTTACAGATGCATAAAT
TGGGACTTTGAGAAGAAACTCTTCCAGCAACATATAGTTATTCCCAGGAGGGAGAAGAAG
GGTCCACAGAGGGCCATGGAAAGAAAGACACATTTACTTCACTGCTTTGTGCAAGGTTGT
GCTAATCCTGTCTTACATCCCTCCTCCCAGGGAGCTGTTTGGACCTGACTCCCTCCTCAG
GGAGTGGGAACTGGAGCACCAGGATTGCAGCATTATCTTAGAGTCCTTGGAGGGGCAGCA
AAGTTTGCTTTAAGGTTAATAAGCTGGCTTCTCTCTCCAAATGTACATAAGCCCTCCACG
TTTTCAGCCTTGGAGCTTGGCCCCCACCTCCTGATGAAGTTTCCTTTCATCTGATTCTTA
TCCTCTTGATGAAAGATGGTTCCTAAAGATAACACACAGCCTATGGTGAAAGGGCACAGG
AAGGCCTTGGGGGCAGTCCTGGGAAGGACAAAGAACTTTCGAAAAGGTTAAGGCTTGGGG
AGATGGGATGGGGGCCCCTGTGGCCTCTCTTCCCTATTACTGCAGAGTGCTCAGATTAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTGAGACCTTG------------------------------------------------
------------------------------------CAAGAAGACAAATCAGATGGCAGA
GTGGTGGGAGGAGATGCAGCCTGATGCTTTAAAGCTTGAGCAAGAATCTTCATCTCTCTG
GGCCTCAGTTCTCTCCCCTATCAAGTGAGGAATTTATGCTGGGATTAACATCTAACAACT
ATGGAATGCCTTTCACATGGCAGGCTCTGTGCTGTGAACTTTCTATGCTTTCTATTTAGC
CCTCCTTACAGTCTTCAGAGGTAAGTGCTATGGTTATTCCCATTTTACAGATGCATAAAT
TGGGACTTTGAGAAGAAACTCTTCCAGCAACATATAGTTATTCCCAGGAGGGAGAAGAAG
GGTCCACAGAGGGCCATGGAAAGAAAGACACATTTACTTCACTGCTTTGTGCAAGGTTGT
GCTAATCCTGTCTTACATCCCTCCTCCCAGGGAGCTGTTTGGACCTGACTCCCTCCTCAG
GGAGTGGGAACTGGAGCACCAGGATTGCAGCATTATCTTAGAGTCCTTGGAGGGGCAGCA
AAGTTTGCTTTAAGGTTAATAAGCTGGCTTCTCTCTCCAAATGTACATAAGCCCTCCACG
TTTTCAGCCTTGGAGCTTGGCCCCCACCTCCTGATGAAGTTTCCTTTCATCTGATTCTTA
TCCTCTTGATGAAAGATGGTTCCTAAAGATAACACACAGCCTATGGTGAAAGGGCACAGG
AAGGCCTTGGGGGCAGTCCTGGGAAGGACAAAGAACTTTCGAAAAGGTTAAGGCTTGGGG
AGATGGGATGGGGGCCCCTGTGGCCTCTCTTCCCTATTACTGCAGAGTGCTCAGATTAAG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               13-406, gnl|bosTau2|chr8 (20630493-20630109)
               

               
               13-406, gnl|Hg17|chr9 (68380684-68380315)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-406, gnl|bosTau2|chr8 (20630493-20630109)
               

               
               13-406, gnl|Hg17|chr9 (68380684-68380315)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ldo (0.0970026)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ldo (0.0970026)

	13-406, gnl\|bosTau2\|chr8 (20630493-20630109)
	13-406, gnl\|Hg17\|chr9 (68380684-68380315)