Non-Coding RNA Search

Ss1.1-Pig1-113P01.5

Sequence:


               
               GAGAGCCCAGAGGTCACGAGCCCCCCGGCTCCACGGGCAGGAGGGCTCAGGTGGGAACTG
CCACCCACCTTGCCCGAGAGCTTTGCCAGAGTGACCACATCCATGACCGTGGCGCTCCGC
CCACCCCCACTGCCTGGCGCCTACATCCACGCAGCCTCGGAGGAGCCTGCTTGGTCCCCT
GCTGCCACACCCGCTGCCAGCGGCTCCAGCAACCTCAGTTCTAGGGGACCGTGTGCAGCC
ACCGGATGAAAGCAGCTAAAGCATTGAGACCCTTTGGGGGCCCCATGAAGTCACTGGGAA
GCCCTGGGTGGGTGACTCAAGGCAGGGCAGACTCCTGGGGGGCCCTGCTGCTGCTGCTGC
TCTCTGCCTCCATCCCTCCCTTGACCCGGCCATCACGGACCCCCGTCGTACCCACACAGA
CCTACCACCCTCGAGGCTGCTCACAGCCTCGCACGCACGGGTCCTCTGTGCGCGTGCTGT
GTCTGGGTCGGGTAAAAGCCAGCACTTCAGGCTGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGAGCCCAGAGGTCACGAGCCCCCCGGCTCCACGGGCAGGAGGGCTCAGGTGGGAACTG
CCACCCACCTTGCCCGAGAGCTTTGCCAGAGTGACCACATCCATGACCGTGGCGCTCCGC
CCACCCCCACTGCCTGGCGCCTACATCCACGCAGCCTCGGAGGAGCCTGCTTGGTCCCCT
GCTGCCACACCCGCTGCCAGCGGCTCCAGCAACCTCAGTTCTAGGGGACCGTGTGCAGCC
ACCGGATGAAAGCAGCTAAAGCATTGAGACCCTTTGGGGGCCCCATGAAGTCACTGGGAA
GCCCTGGGTGGGTGACTCAAGGCAGGGCAGACTCCTGGGGGGCCCTGCTGCTGCTGCTGC
TCTCTGCCTCCATCCCTCCCTTGACCCGGCCATCACGGACCCCCGTCGTACCCACACAGA
CCTACCACCCTCGAGGCTGCTCACAGCCTCGCACGCACGGGTCCTCTGTGCGCGTGCTGT
GTCTGGGTCGGGTAAAAGCCAGCACTTCAGGCTGCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-516, gnl|bosTau2|chr3 (68176951-68176438)
               

               
               1-516, gnl|Hg17|chr1 (44957416-44956938)
               

               
               1-516, gnl|Mm7|chr4 (116491097-116491581)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-516, gnl|bosTau2|chr3 (68176951-68176438)
               

               
               1-516, gnl|Hg17|chr1 (44957416-44956938)
               

               
               1-516, gnl|Mm7|chr4 (116491097-116491581)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pty (0.142714)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.142714)

	1-516, gnl\|bosTau2\|chr3 (68176951-68176438)
	1-516, gnl\|Hg17\|chr1 (44957416-44956938)
	1-516, gnl\|Mm7\|chr4 (116491097-116491581)