Ss1.1-Pig1-113P22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGAGCACCCACTGCTGCCATTCTACCCCCCGGAGGGAGCCCTGGAGGCGGGGCTGGACC GGAATGGGAGCACCCTGCCCTCCACCGAGGGGCCGCCGAGTCCCAGGAACCAGCCCAACA CGGCCCTGCTGTCTCTCATCCTCATGCTCGGGACCTTCCTCATTGCCTTCTTCCTCCGCA AGTTCAGGAACAGCCGCTTCCTGGGTGGCAAGGCTCGCCGCATCATTGGGGACTTCGGCA TCCCCATCTCCATTCTGGTGATGGTCCTGGTGGATTACTCCATTACGGACACCTACACCC AGAAGCTGACCGTGCCCACGGGGCTCTCAGTGACCTCCCCCCATAAGCGCACGTGGTTCA TCCCGCCCCTGGGCAGTGCCCGTCCTTTCCCGCCATGGATGATGGTGGCAGCCGCCGTGC CCGCCCTCCTGGTCCTCATCCTGATCTTCATGGAGACACAGATCACTGCGCTCATCGTCA GCCAGAAGGCACGGAGGCTACTCAAAGGCTCCGGCTTCCATTTGGACCTGCTTCTCATCG GCTCTTTGGGTGGGCTCTGTGGGCTCTTTGGGTTGCCCTGGCTCACGGCCGCCACTGTCC GCTCGGTCACCCACGTGAATGCACTGACCGTTATGCGCACTGCCATTGCGCCCGGCGACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGAGCACCCACTGCTGCCATTCTACCCCCCGGAGGGAGCCCTGGAGGCGGGGCTGGACC GGAATGGGAGCACCCTGCCCTCCACCGAGGGGCCGCCGAGTCCCAGGAACCAGCCCAACA CGGCCCTGCTGTCTCTCATCCTCATGCTCGGGACCTTCCTCATTGCCTTCTTCCTCCGCA AGTTCAGGAACAGCCGCTTCCTGGGTGGCAAGGCTCGCCGCATCATTGGGGACTTCGGCA TCCCCATCTCCATTCTGGTGATGGTCCTGGTGGATTACTCCATTACGGACACCTACACCC AGAAGCTGACCGTGCCCACGGGGCTCTCAGTGACCTCCCCCCATAAGCGCACGTGGTTCA TCCCGCCCCTGGGCAGTGCCCGTCCTTTCCCGCCATGGATGATGGTGGCAGCCGCCGTGC CCGCCCTCCTGGTCCTCATCCTGATCTTCATGGAGACACAGATCACTGCGCTCATCGTCA GCCAGAAGGCACGGAGGCTACTCAAAGGCTCCGGCTTCCATTTGGACCTGCTTCTCATCG GCTCTTTGGGTGGGCTCTGTGGGCTCTTTGGGTTGCCCTGGCTCACGGCCGCCACTGTCC GCTCGGTCACCCACGTGAATGCACTGACCGTTATGCGCACTGCCATTGCGCCCGGCGACA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 1-213, gnl|bosTau2|chr2 (64239133-64238921) | |
| 1-213, gnl|Hg17|chr2 (220327815-220328039) | |
| 1-213, gnl|Mm7|chr1 (75781124-75781336) | |
| 300-466, gnl|bosTau2|chr4 (64521665-64521499) | |
| 300-466, gnl|canFam2|chr16 (18072815-18072998) | |
| 300-466, gnl|danRer3|chr23 (36095933-36096116) | |
| 300-466, gnl|dasNov1|scaffold_81965 (561-378) | |
| 300-466, gnl|echTel1|scaffold_262128 (2375-2558) | |
| 300-466, gnl|fr1|chrUn (3443803-3443986) | |
| 300-466, gnl|galGal2|chr7 (22841008-22840824) | |
| 300-466, gnl|hg17|chr7 (150209400-150209583) | |
| 300-466, gnl|Hg17|chr7 (150209407-150209573) | |
| 300-466, gnl|loxAfr1|scaffold_40965 (8845-9028) | |
| 300-466, gnl|mm7|chr5 (23479715-23479898) | |
| 300-466, gnl|Mm7|chr5 (23479722-23479888) | |
| 300-466, gnl|monDom2|scaffold_7 (11228776-11228960) | |
| 300-466, gnl|oryCun1|scaffold_199766 (639-456) | |
| 300-466, gnl|panTro1|chr6_random (16715785-16715602) | |
| 300-466, gnl|rheMac2|chr3 (188021514-188021697) | |
| 300-466, gnl|rn3|chr4 (6102486-6102303) | |
| 300-466, gnl|tetNig1|chr6 (4892455-4892638) | |
| 300-466, gnl|xenTro1|scaffold_1295 (97789-97973) | |
| 470-639, gnl|bosTau2|chr19 (38045528-38045697) | |
| 470-639, gnl|canFam2|chr9 (22472571-22472382) | |
| 470-639, gnl|danRer3|chr3 (10832029-10831848) | |
| 470-639, gnl|dasNov1|scaffold_24609 (4547-4358) | |
| 470-639, gnl|echTel1|scaffold_320420 (80978-80789) | |
| 470-639, gnl|fr1|chrUn (170757172-170756991) | |
| 470-639, gnl|galGal2|chr7 (22840246-22840435) | |
| 470-639, gnl|hg17|chr17 (39686079-39686268) | |
| 470-639, gnl|Hg17|chr17 (39686265-39686096) | |
| 470-639, gnl|loxAfr1|scaffold_5710 (33709-33898) | |
| 470-639, gnl|mm7|chr11 (102461545-102461734) | |
| 470-639, gnl|Mm7|chr11 (102461731-102461562) | |
| 470-639, gnl|monDom2|scaffold_18 (42508319-42508130) | |
| 470-639, gnl|oryCun1|scaffold_211330 (4779-4968) | |
| 470-639, gnl|panTro1|chr19 (42874400-42874589) | |
| 470-639, gnl|rheMac2|chr3 (188022294-188022105) | |
| 470-639, gnl|rn3|chr10 (91473047-91473236) | |
| 470-639, gnl|tetNig1|chrUn_random (102234973-102235154) | |
| 470-639, gnl|xenTro1|scaffold_316 (681927-681750) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-213, gnl|bosTau2|chr2 (64239133-64238921) | |
| 1-213, gnl|Hg17|chr2 (220327815-220328039) | |
| 1-213, gnl|Mm7|chr1 (75781124-75781336) | |
| 300-466, gnl|bosTau2|chr4 (64521665-64521499) | |
| 300-466, gnl|canFam2|chr16 (18072815-18072998) | |
| 300-466, gnl|danRer3|chr23 (36095933-36096116) | |
| 300-466, gnl|dasNov1|scaffold_81965 (561-378) | |
| 300-466, gnl|echTel1|scaffold_262128 (2375-2558) | |
| 300-466, gnl|fr1|chrUn (3443803-3443986) | |
| 300-466, gnl|galGal2|chr7 (22841008-22840824) | |
| 300-466, gnl|hg17|chr7 (150209400-150209583) | |
| 300-466, gnl|Hg17|chr7 (150209407-150209573) | |
| 300-466, gnl|loxAfr1|scaffold_40965 (8845-9028) | |
| 300-466, gnl|mm7|chr5 (23479715-23479898) | |
| 300-466, gnl|Mm7|chr5 (23479722-23479888) | |
| 300-466, gnl|monDom2|scaffold_7 (11228776-11228960) | |
| 300-466, gnl|oryCun1|scaffold_199766 (639-456) | |
| 300-466, gnl|panTro1|chr6_random (16715785-16715602) | |
| 300-466, gnl|rheMac2|chr3 (188021514-188021697) | |
| 300-466, gnl|rn3|chr4 (6102486-6102303) | |
| 300-466, gnl|tetNig1|chr6 (4892455-4892638) | |
| 300-466, gnl|xenTro1|scaffold_1295 (97789-97973) | |
| 470-639, gnl|bosTau2|chr19 (38045528-38045697) | |
| 470-639, gnl|canFam2|chr9 (22472571-22472382) | |
| 470-639, gnl|danRer3|chr3 (10832029-10831848) | |
| 470-639, gnl|dasNov1|scaffold_24609 (4547-4358) | |
| 470-639, gnl|echTel1|scaffold_320420 (80978-80789) | |
| 470-639, gnl|fr1|chrUn (170757172-170756991) | |
| 470-639, gnl|galGal2|chr7 (22840246-22840435) | |
| 470-639, gnl|hg17|chr17 (39686079-39686268) | |
| 470-639, gnl|Hg17|chr17 (39686265-39686096) | |
| 470-639, gnl|loxAfr1|scaffold_5710 (33709-33898) | |
| 470-639, gnl|mm7|chr11 (102461545-102461734) | |
| 470-639, gnl|Mm7|chr11 (102461731-102461562) | |
| 470-639, gnl|monDom2|scaffold_18 (42508319-42508130) | |
| 470-639, gnl|oryCun1|scaffold_211330 (4779-4968) | |
| 470-639, gnl|panTro1|chr19 (42874400-42874589) | |
| 470-639, gnl|rheMac2|chr3 (188022294-188022105) | |
| 470-639, gnl|rn3|chr10 (91473047-91473236) | |
| 470-639, gnl|tetNig1|chrUn_random (102234973-102235154) | |
| 470-639, gnl|xenTro1|scaffold_316 (681927-681750) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.118301) |