Non-Coding RNA Search

Ss1.1-Pig1-114D14.5

Sequence:


               
               GGCGTCTTTCCCCTCCGGGCTTCGAGGAAGGGTCAGTGGGGCCGAGGCACCCTGGGGAGG
GGACCCAGGGCAAAGAGGTTCTCGCAGGGGCGAAATCATTCGAGGGGGGGGTCTCTGACT
GGGAAAAAAGACCTGCATCGCCACTGGGGTAAGAAGTACCACCCGCGACCCTGAGGCCGC
AGGGGCAGGGAAGCGGGGCATGTACCTGAAGGAACTTCAAGGCAACGAGGCGGAATCCCT
TCTGCTCGAAGCGCTTGATGATCTCGCCCACGAGACCGCGCTGGACGCCGTCCGGCTTGA
CCGCGATGAAGAGTCACTGCCATGGATGATGTTTCTGGATGGACAAAGAGAAGGCCGAAA
TTACCAAGACCAGAAGGACTAAACTGCCCAGAAGCTCCCCTCATTCCCACTGCTAGAAAG
CCAACAATCACTGGAGTAGGAAAAAAACAAAGCTCCATGTACATTATTCCATGTCAAAAG
CAAAAAACCCATGACTACCAGGGAATTAGGAAATGCCCTCCCCACCTCCATCCCTTCTAG
CAACACTGATGCAAGCAGTGGCAGCCTTCAGGAAGGACACTGGCCAGCAAAGTCCACTGC
ACCAGGTTCTGCTCTCACAGCAGAGGGGCAACCAGTGATGTTGATGACCAAGCAGAGAGC
CTGCCAAGCCAAACACCAATTTAAGATGGAACAAAATCTGATTCCAAATTGATCAGTATA
TGGTATCATATCTATCCCCAGTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGTCTTTCCCCTCCGGGCTTCGAGGAAGGGTCAGTGGGGCCGAGGCACCCTGGGGAGG
GGACCCAGGGCAAAGAGGTTCTCGCAGGGGCGAAATCATTCGAGGGGGGGGTCTCTGACT
GGGAAAAAAGACCTGCATCGCCACTGGGGTAAGAAGTACCACCCGCGACCCTGAGGCCGC
AGGGGCAGGGAAGCGGGGCATGTACCTGAAGGAACTTCAAGGCAACGAGGCGGAATCCCT
TCTGCTCGAAGCGCTTGATGATCTCGCCCACGAGACCGCGCTGGACGCCGTCCGGCTTGA
CCGCGATGAAGAGTCACTGCCATGGATGATGTTTCTGGATGGACAAAGAGAAGGCCGAAA
TTACCAAGACCAGAAGGACTAAACTGCCCAGAAGCTCCCCTCATTCCCACTGCTAGAAAG
CCAACAATCACTGGAGTAGGAAAAAAACAAAGCTCCATGTACATTATTCCATGTCAAAAG
CAAAAAACCCATGACTACCAGGGAATTAGGAAATGCCCTCCCCACCTCCATCCCTTCTAG
CAACACTGATGCAAGCAGTGGCAGCCTTCAGGAAGGACACTGGCCAGCAAAGTCCACTGC
ACCAGGTTCTGCTCTCACAGCAGAGGGGCAACCAGTGATGTTGATGACCAAGCAGAGAGC
CTGCCAAGCCAAACACCAATTTAAGATGGAACAAAATCTGATTCCAAATTGATCAGTATA
TGGTATCATATCTATCCCCAGTTT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|1304478|gb|AAA99064.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|1304478|gb|AAA99064.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               17-337, gnl|bosTau2|chr19 (28472753-28472441)
               

               
               17-337, gnl|Hg17|chr17 (46599484-46599184)
               

               
               17-337, gnl|Mm7|chr11 (94064346-94064666)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-337, gnl|bosTau2|chr19 (28472753-28472441)
               

               
               17-337, gnl|Hg17|chr17 (46599484-46599184)
               

               
               17-337, gnl|Mm7|chr11 (94064346-94064666)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pla (0.133672)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	17-337, gnl\|bosTau2\|chr19 (28472753-28472441)
	17-337, gnl\|Hg17\|chr17 (46599484-46599184)
	17-337, gnl\|Mm7\|chr11 (94064346-94064666)