Ss1.1-Pig1-114M04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACTGCATCTTCGCGGGCCAGCTACGAGAGGATCTGGGGTCGCGCTGGGCGCCCGACGGAC CCTCCCCAGGGACTCGCCTGCCCCACACCGCCCGGCCTTGCCCGGCGCTCCGCGTCAGGT TCCCCAGCCGCAGCCTTACCTACGGGCTCCAGAATCCTCAGGGCTTCCAGAGGATGCTCA GCCCACCGACGGGGACCTCGGGGCAGCAGTGAGGGGGGCACCCAGCCCCCCATTCAGCTC CTGTCCTCTTGGGCCGGGGGCCTCCCCGGGGGGAAGAGCATGGTGGTTTTCCCTTGGAGC CCCCTGGCTTGGTACGTCTGAGAAGATGCCTGCCATGAGGCTCTTCACTTGCTTCCTGCA GCTTCTGGCTGGGCTGGCACTGCCGGCTGTGCCCCCCCAGCAGTGGGCCTTGTCTGCTGG GAACAGCTCATCGGAGGTGGAAGTGGTGCCCTTCCAGGAGGTGTGGGGCCGCAGCTACTG CCGGGCGCTGGAGAGGCTGGTGGACATCGTGTCTGTGTACCCCAGTGAGGTGGAGCACAT GTTCAGCCCGTCCTGCGTCTCCCTGCTGCGCTGCACCGGCTGCTGTGGCGACGAGAACCT GCACTGTGTGCCCGTGGAGACGGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACTGCATCTTCGCGGGCCAGCTACGAGAGGATCTGGGGTCGCGCTGGGCGCCCGACGGAC CCTCCCCAGGGACTCGCCTGCCCCACACCGCCCGGCCTTGCCCGGCGCTCCGCGTCAGGT TCCCCAGCCGCAGCCTTACCTACGGGCTCCAGAATCCTCAGGGCTTCCAGAGGATGCTCA GCCCACCGACGGGGACCTCGGGGCAGCAGTGAGGGGGGCACCCAGCCCCCCATTCAGCTC CTGTCCTCTTGGGCCGGGGGCCTCCCCGGGGGGAAGAGCATGGTGGTTTTCCCTTGGAGC CCCCTGGCTTGGTACGTCTGAGAAGATGCCTGCCATGAGGCTCTTCACTTGCTTCCTGCA GCTTCTGGCTGGGCTGGCACTGCCGGCTGTGCCCCCCCAGCAGTGGGCCTTGTCTGCTGG GAACAGCTCATCGGAGGTGGAAGTGGTGCCCTTCCAGGAGGTGTGGGGCCGCAGCTACTG CCGGGCGCTGGAGAGGCTGGTGGACATCGTGTCTGTGTACCCCAGTGAGGTGGAGCACAT GTTCAGCCCGTCCTGCGTCTCCCTGCTGCGCTGCACCGGCTGCTGTGGCGACGAGAACCT GCACTGTGTGCCCGTGGAGACGGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 25-377, gnl|bosTau2|chr10 (56575526-56575191) | |
| 25-377, gnl|Hg17|chr14 (74491997-74491647) | |
| 25-377, gnl|Mm7|chr12 (83177075-83176750) | |
| 442-621, gnl|bosTau2|chr10 (56569720-56569541) | |
| 442-621, gnl|canFam2|chr8 (51104351-51104535) | |
| 442-621, gnl|danRer3|chr17 (46293435-46293623) | |
| 442-621, gnl|dasNov1|scaffold_36693 (10326-10489) | |
| 442-621, gnl|echTel1|scaffold_241600 (910-1098) | |
| 442-621, gnl|fr1|chrUn (34972131-34972316) | |
| 442-621, gnl|galGal2|chrUn (153632675-153632857) | |
| 442-621, gnl|hg17|chr14 (74485805-74485993) | |
| 442-621, gnl|Hg17|chr14 (74486011-74485832) | |
| 442-621, gnl|loxAfr1|scaffold_6088 (11017-11205) | |
| 442-621, gnl|mm7|chr12 (83171490-83171678) | |
| 442-621, gnl|Mm7|chr12 (83171696-83171517) | |
| 442-621, gnl|monDom2|scaffold_8 (59603981-59603796) | |
| 442-621, gnl|oryCun1|scaffold_201943 (17858-18046) | |
| 442-621, gnl|panTro1|chr15 (74489401-74489589) | |
| 442-621, gnl|rheMac2|chr7 (138064773-138064961) | |
| 442-621, gnl|rn3|chr6 (109223804-109223992) | |
| 442-621, gnl|tetNig1|chr10 (4963073-4963257) | |
| 442-621, gnl|xenTro1|scaffold_1767 (54291-54107) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 25-377, gnl|bosTau2|chr10 (56575526-56575191) | |
| 25-377, gnl|Hg17|chr14 (74491997-74491647) | |
| 25-377, gnl|Mm7|chr12 (83177075-83176750) | |
| 442-621, gnl|bosTau2|chr10 (56569720-56569541) | |
| 442-621, gnl|canFam2|chr8 (51104351-51104535) | |
| 442-621, gnl|danRer3|chr17 (46293435-46293623) | |
| 442-621, gnl|dasNov1|scaffold_36693 (10326-10489) | |
| 442-621, gnl|echTel1|scaffold_241600 (910-1098) | |
| 442-621, gnl|fr1|chrUn (34972131-34972316) | |
| 442-621, gnl|galGal2|chrUn (153632675-153632857) | |
| 442-621, gnl|hg17|chr14 (74485805-74485993) | |
| 442-621, gnl|Hg17|chr14 (74486011-74485832) | |
| 442-621, gnl|loxAfr1|scaffold_6088 (11017-11205) | |
| 442-621, gnl|mm7|chr12 (83171490-83171678) | |
| 442-621, gnl|Mm7|chr12 (83171696-83171517) | |
| 442-621, gnl|monDom2|scaffold_8 (59603981-59603796) | |
| 442-621, gnl|oryCun1|scaffold_201943 (17858-18046) | |
| 442-621, gnl|panTro1|chr15 (74489401-74489589) | |
| 442-621, gnl|rheMac2|chr7 (138064773-138064961) | |
| 442-621, gnl|rn3|chr6 (109223804-109223992) | |
| 442-621, gnl|tetNig1|chr10 (4963073-4963257) | |
| 442-621, gnl|xenTro1|scaffold_1767 (54291-54107) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.126502) |