Non-Coding RNA Search

Ss1.1-Pig1-115E19.5

Sequence:


               
               ACTTTTTTTGGAAGTCCTAAGACTGATCTCCAGGACCAGGACTCTTCTCCCAGCCGCTAG
AGCCCCGCTCAGGCCAAGGCCTTCCCTGCCATGCGACCAGTCAGTGTCTGGCAGTGGAGC
CCACAGGGGCTGCTGCTGTGCCTGCTGTGCAACTTGTGCCTCGGATCTCCATCCCCATCC
ACGGCCCCTGAGATGAGGGCCGGGAGCCAGGACCTGCGGTTCCGGCTGGCTGGCTTCCCC
AGAAAGCCCTTCGAGGGCCGCGTGGAGATACAGCGAGCAGGCGAATGGGGCACCATCTGC
GATGACGACTTCACGCTGCAGGCTGCCCATGTCTTATGCCGGGAGCTGGGCTTCACAGAG
GCCACAGGCTGGACCCACAGTGCCAAATATGGCCCCGGAACAGGCCGTATCTGGCTGGAC
AACCTGAACTGCAGAGGGACTGAGCAGAGTGTGACTGAATGTGCCTCCCGGGGCTGGGGG
AACAGTGACTGTACCCACGATGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTTTTTTGGAAGTCCTAAGACTGATCTCCAGGACCAGGACTCTTCTCCCAGCCGCTAG
AGCCCCGCTCAGGCCAAGGCCTTCCCTGCCATGCGACCAGTCAGTGTCTGGCAGTGGAGC
CCACAGGGGCTGCTGCTGTGCCTGCTGTGCAACTTGTGCCTCGGATCTCCATCCCCATCC
ACGGCCCCTGAGATGAGGGCCGGGAGCCAGGACCTGCGGTTCCGGCTGGCTGGCTTCCCC
AGAAAGCCCTTCGAGGGCCGCGTGGAGATACAGCGAGCAGGCGAATGGGGCACCATCTGC
GATGACGACTTCACGCTGCAGGCTGCCCATGTCTTATGCCGGGAGCTGGGCTTCACAGAG
GCCACAGGCTGGACCCACAGTGCCAAATATGGCCCCGGAACAGGCCGTATCTGGCTGGAC
AACCTGAACTGCAGAGGGACTGAGCAGAGTGTGACTGAATGTGCCTCCCGGGGCTGGGGG
AACAGTGACTGTACCCACGATGAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|4007989|gb|AAC95338.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|4007989|gb|AAC95338.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               74-404, gnl|bosTau2|chr11 (7741295-7741625)
               

               
               74-404, gnl|Hg17|chr2 (74691433-74691103)
               

               
               74-404, gnl|Mm7|chr6 (83060903-83061232)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               74-404, gnl|bosTau2|chr11 (7741295-7741625)
               

               
               74-404, gnl|Hg17|chr2 (74691433-74691103)
               

               
               74-404, gnl|Mm7|chr6 (83060903-83061232)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.267344)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)

	74-404, gnl\|bosTau2\|chr11 (7741295-7741625)
	74-404, gnl\|Hg17\|chr2 (74691433-74691103)
	74-404, gnl\|Mm7\|chr6 (83060903-83061232)