Non-Coding RNA Search

Ss1.1-Pig1-115F09.5

Sequence:


               
               ACTCGTTGCCACCAAAGGACTGACGGCCGCTCAGCCCCCGGGACGGCTGTGGGAGAGGAG
GAGCCGATGGGGACCGCCACCGCGCCCAGGGCAGGTGCCCAGCAGCTCGTGGTCAAAGCA
CTGTTGCTATAAGCTATTTCTGGGGGGCCTCTAGGGCCCCCTTCCCTCAGCGCACCTCTG
GGGACAGATCACACTGTATTTACTTGAGAGGGTTTGCCTCACTGACAATAAACGGAGACC
ACCTCAGTGGCCAGGGCCCTGCGGCCTGGGGGTGCCTTTTCCTCGCCAAGACGGCGTCCC
CCCGCCTCTGCCACGCTCTGTGGCCGGCGTGTCTGCTTGCCCAGCGGGGCAGGGAGGCCC
CCCCTCCTCTGCGGGGAGGGGGGCTCCCACACCCGTGCAGCCCTCGGCCGCCTCCTTCCT
AACGTGCCTGTTGGTCTGGAGCTGGGGTCACCAACTCCAGTGCCTTTGGGGGCCGGGCAG
GTGACAAAGAAGAACTGGGCTGGGCGTATCCTGAGGGACGGGCCTGTCAGGCGACTGGGT
GTTGGGAGACTCGGCTGGTGGGGACTGGGGGTGACCTGGGGTGGATATGCCGTAGCTCAA
GGGAAAAGTCTCACTTAAGTAGACTGTGGGCTGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTCGTTGCCACCAAAGGACTGACGGCCGCTCAGCCCCCGGGACGGCTGTGGGAGAGGAG
GAGCCGATGGGGACCGCCACCGCGCCCAGGGCAGGTGCCCAGCAGCTCGTGGTCAAAGCA
CTGTTGCTATAAGCTATTTCTGGGGGGCCTCTAGGGCCCCCTTCCCTCAGCGCACCTCTG
GGGACAGATCACACTGTATTTACTTGAGAGGGTTTGCCTCACTGACAATAAACGGAGACC
ACCTCAGTGGCCAGGGCCCTGCGGCCTGGGGGTGCCTTTTCCTCGCCAAGACGGCGTCCC
CCCGCCTCTGCCACGCTCTGTGGCCGGCGTGTCTGCTTGCCCAGCGGGGCAGGGAGGCCC
CCCCTCCTCTGCGGGGAGGGGGGCTCCCACACCCGTGCAGCCCTCGGCCGCCTCCTTCCT
AACGTGCCTGTTGGTCTGGAGCTGGGGTCACCAACTCCAGTGCCTTTGGGGGCCGGGCAG
GTGACAAAGAAGAACTGGGCTGGGCGTATCCTGAGGGACGGGCCTGTCAGGCGACTGGGT
GTTGGGAGACTCGGCTGGTGGGGACTGGGGGTGACCTGGGGTGGATATGCCGTAGCTCAA
GGGAAAAGTCTCACTTAAGTAGACTGTGGGCTGTGG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               5-418, gnl|bosTau2|chr5 (67038108-67037696)
               

               
               5-418, gnl|Hg17|chr22 (36662273-36662679)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-418, gnl|bosTau2|chr5 (67038108-67037696)
               

               
               5-418, gnl|Hg17|chr22 (36662273-36662679)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               med (0.116252)
               

               
               nbm (0.0993246)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)
               

               
               nbm (0.0993246)

	5-418, gnl\|bosTau2\|chr5 (67038108-67037696)
	5-418, gnl\|Hg17\|chr22 (36662273-36662679)