Ss1.1-Pig1-117E24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTCCAAGATGGCGGCGGCGACGGCGGATCCGGGAGCTGGGAGCCCGCAGGGTTGGAGAC TCCTCCGGCGGGGGCGCTGGGGGCGGGCTGCCGTCTCCGGGGGAGCAGGAACTGAGCCGG CGCCTGCAGCGCCTGTATCCCGCGGTCAACCAGCATGAGACGCCGCTGCCGCGCTCCTGG AGCCCCAAGGACAAGTACAACTATATCGGCCTCTCCCAGGGCAACCTCCGCGTCCACTAG CAAAGGTCATGGCAAAAATCACAAAGATGCAGCCTCAGTGCGCGCCACCCACCCCATACC TGCTGCCTGTGGCATTTATTACTTTGAGGTGAAGATTGTCAGCAAAGGAAGAGATGGGTA CATGGGAATAGGACTCTCAGCTCAAGGAGTCAGCATGAACAGACTTCCTGGTTGGGATAA ACATTCCTATGGTTACCATGGTGATGATGGGCATTCCTTCTGCTCCTCTGGGACTGGCCA GCCCTATGGGCCGACATTCACCACAGGAGATGTGATTGGCTGCTGCGTCAACCTCATCAA TGGCACCTGCTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTCCAAGATGGCGGCGGCGACGGCGGATCCGGGAGCTGGGAGCCCGCAGGGTTGGAGAC TCCTCCGGCGGGGGCGCTGGGGGCGGGCTGCCGTCTCCGGGGGAGCAGGAACTGAGCCGG CGCCTGCAGCGCCTGTATCCCGCGGTCAACCAGCATGAGACGCCGCTGCCGCGCTCCTGG AGCCCCAAGGACAAGTACAACTATATCGGCCTCTCCCAGGGCAACCTCCGCGTCCACTAG CAAAGGTCATGGCAAAAATCACAAAGATGCAGCCTCAGTGCGCGCCACCCACCCCATACC TGCTGCCTGTGGCATTTATTACTTTGAGGTGAAGATTGTCAGCAAAGGAAGAGATGGGTA CATGGGAATAGGACTCTCAGCTCAAGGAGTCAGCATGAACAGACTTCCTGGTTGGGATAA ACATTCCTATGGTTACCATGGTGATGATGGGCATTCCTTCTGCTCCTCTGGGACTGGCCA GCCCTATGGGCCGACATTCACCACAGGAGATGTGATTGGCTGCTGCGTCAACCTCATCAA TGGCACCTGCTT |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-247, gnl|bosTau2|chr18 (15029484-15029728) | |
| 1-247, gnl|canFam2|chr35 (16166478-16166617) | |
| 1-247, gnl|danRer3|chr24 (7466657-7466829) | |
| 1-247, gnl|dasNov1|scaffold_11150 (36727-36579) | |
| 1-247, gnl|echTel1|scaffold_319405 (53730-53894) | |
| 1-247, gnl|fr1|chrUn (252107956-252108123) | |
| 1-247, gnl|galGal2|chr11 (834028-834175) | |
| 1-247, gnl|Hg17|chr16 (66397948-66397704) | |
| 1-247, gnl|hg17|chr6 (13819144-13819316) | |
| 1-247, gnl|loxAfr1|scaffold_17502 (44747-44919) | |
| 1-247, gnl|mm7|chr13 (42920676-42920848) | |
| 1-247, gnl|Mm7|chr8 (104426047-104425803) | |
| 1-247, gnl|monDom2|scaffold_3 (101520956-101521128) | |
| 1-247, gnl|oryCun1|scaffold_204307 (155938-155790) | |
| 1-247, gnl|panTro1|chr5 (14112290-14112462) | |
| 1-247, gnl|rheMac2|chr4 (13683274-13683446) | |
| 1-247, gnl|rn3|chr17 (27047042-27046870) | |
| 1-247, gnl|tetNig1|chr15 (579230-579059) | |
| 1-247, gnl|xenTro1|scaffold_6762 (5488-5673) | |
| 410-552, gnl|bosTau2|chr23 (38930092-38929950) | |
| 410-552, gnl|canFam2|chr35 (16111465-16111660) | |
| 410-552, gnl|danRer3|chr24 (7460611-7460792) | |
| 410-552, gnl|dasNov1|scaffold_3887 (37408-37228) | |
| 410-552, gnl|echTel1|scaffold_325025 (65884-65689) | |
| 410-552, gnl|fr1|chrUn (252101831-252102010) | |
| 410-552, gnl|galGal2|chr2 (60291420-60291615) | |
| 410-552, gnl|hg17|chr6 (13765304-13765499) | |
| 410-552, gnl|Hg17|chr6 (13765488-13765346) | |
| 410-552, gnl|loxAfr1|scaffold_55725 (1986-1791) | |
| 410-552, gnl|mm7|chr13 (42875064-42875259) | |
| 410-552, gnl|Mm7|chr13 (42875248-42875106) | |
| 410-552, gnl|monDom2|scaffold_3 (101468740-101468935) | |
| 410-552, gnl|oryCun1|scaffold_205544 (304-110) | |
| 410-552, gnl|panTro1|chr5 (14056496-14056691) | |
| 410-552, gnl|rheMac2|chr4 (13625060-13625255) | |
| 410-552, gnl|rn3|chr17 (27095594-27095399) | |
| 410-552, gnl|tetNig1|chr15 (581459-581279) | |
| 410-552, gnl|xenTro1|scaffold_923 (315507-315689) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-247, gnl|bosTau2|chr18 (15029484-15029728) | |
| 1-247, gnl|canFam2|chr35 (16166478-16166617) | |
| 1-247, gnl|danRer3|chr24 (7466657-7466829) | |
| 1-247, gnl|dasNov1|scaffold_11150 (36727-36579) | |
| 1-247, gnl|echTel1|scaffold_319405 (53730-53894) | |
| 1-247, gnl|fr1|chrUn (252107956-252108123) | |
| 1-247, gnl|galGal2|chr11 (834028-834175) | |
| 1-247, gnl|Hg17|chr16 (66397948-66397704) | |
| 1-247, gnl|hg17|chr6 (13819144-13819316) | |
| 1-247, gnl|loxAfr1|scaffold_17502 (44747-44919) | |
| 1-247, gnl|mm7|chr13 (42920676-42920848) | |
| 1-247, gnl|Mm7|chr8 (104426047-104425803) | |
| 1-247, gnl|monDom2|scaffold_3 (101520956-101521128) | |
| 1-247, gnl|oryCun1|scaffold_204307 (155938-155790) | |
| 1-247, gnl|panTro1|chr5 (14112290-14112462) | |
| 1-247, gnl|rheMac2|chr4 (13683274-13683446) | |
| 1-247, gnl|rn3|chr17 (27047042-27046870) | |
| 1-247, gnl|tetNig1|chr15 (579230-579059) | |
| 1-247, gnl|xenTro1|scaffold_6762 (5488-5673) | |
| 410-552, gnl|bosTau2|chr23 (38930092-38929950) | |
| 410-552, gnl|canFam2|chr35 (16111465-16111660) | |
| 410-552, gnl|danRer3|chr24 (7460611-7460792) | |
| 410-552, gnl|dasNov1|scaffold_3887 (37408-37228) | |
| 410-552, gnl|echTel1|scaffold_325025 (65884-65689) | |
| 410-552, gnl|fr1|chrUn (252101831-252102010) | |
| 410-552, gnl|galGal2|chr2 (60291420-60291615) | |
| 410-552, gnl|hg17|chr6 (13765304-13765499) | |
| 410-552, gnl|Hg17|chr6 (13765488-13765346) | |
| 410-552, gnl|loxAfr1|scaffold_55725 (1986-1791) | |
| 410-552, gnl|mm7|chr13 (42875064-42875259) | |
| 410-552, gnl|Mm7|chr13 (42875248-42875106) | |
| 410-552, gnl|monDom2|scaffold_3 (101468740-101468935) | |
| 410-552, gnl|oryCun1|scaffold_205544 (304-110) | |
| 410-552, gnl|panTro1|chr5 (14056496-14056691) | |
| 410-552, gnl|rheMac2|chr4 (13625060-13625255) | |
| 410-552, gnl|rn3|chr17 (27095594-27095399) | |
| 410-552, gnl|tetNig1|chr15 (581459-581279) | |
| 410-552, gnl|xenTro1|scaffold_923 (315507-315689) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |