Non-Coding RNA Search

Ss1.1-Pig1-117J24.5

Sequence:


               
               GTTTGTGTTTCATGTGTTGTAAACAGTAGTGGAACATACTTTTAAATTTTGTTTAAAAAA
ATTTTTTTTAATCCAATCTTTCAAGAACTGTTCCATTCTTTTGTTTCTTTTGGGGGGTGG
GGAGGGTGGTTACCCATTAATTTGTTTTGAAATATTTAGACATTCTTTGAGTTATGAAAT
TGTGATGCACGGATTTATGAGAATTCACATGTGAAAGATGACTTCACTAGCTATCCACAT
AAGCAGAATAAAGTGTGTATATGTACATAAAATGTAAGTAATCTTAACTCCATTGTGCAG
TGCCTTTTAGATGTTCCGCTTTCTATAAAGTCTTCAAATTTTTGCATATATATATTATAT
ATATATGATGTAATGTTATAGAAATATATGTATAATATACATATTTTTTTCCAGGGGTAT
CTGATAGCTCTGTATTTTGTTATGGAAGTTGAAAGAAAAAAAAAGTATTTTACCTCAGAA
ATTAAATAAAAAAAAATACTTTTAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTGTGTTTCATGTGTTGTAAACAGTAGTGGAACATACTTTTAAATTTTGTTTAAAAAA
ATTTTTTTTAATCCAATCTTTCAAGAACTGTTCCATTCTTTTGTTTCTTTTGGGGGGTGG
GGAGGGTGGTTACCCATTAATTTGTTTTGAAATATTTAGACATTCTTTGAGTTATGAAAT
TGTGATGCACGGATTTATGAGAATTCACATGTGAAAGATGACTTCACTAGCTATCCACAT
AAGCAGAATAAAGTGTGTATATGTACATAAAATGTAAGTAATCTTAACTCCATTGTGCAG
TGCCTTTTAGATGTTCCGCTTTCTATAAAGTCTTCAAATTTTTGCATATATATATTATAT
ATATATGATGTAATGTTATAGAAATATATGTATAATATACATATTTTTTTCCAGGGGTAT
CTGATAGCTCTGTATTTTGTTATGGAAGTTGAAAGAAAAAAAAAGTATTTTACCTCAGAA
ATTAAATAAAAAAAAATACTTTTAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-496, gnl|bosTau2|chr3 (10135775-10135291)
               

               
               1-496, gnl|Hg17|chr1 (153904555-153904069)
               

               
               1-496, gnl|Mm7|chr3 (87653469-87653950)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-496, gnl|bosTau2|chr3 (10135775-10135291)
               

               
               1-496, gnl|Hg17|chr1 (153904555-153904069)
               

               
               1-496, gnl|Mm7|chr3 (87653469-87653950)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cag (0.151194)
               

               
               spc (0.113366)
               

               
               jej (0.0989218)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cag (0.151194)
               

               
               spc (0.113366)
               

               
               jej (0.0989218)

	1-496, gnl\|bosTau2\|chr3 (10135775-10135291)
	1-496, gnl\|Hg17\|chr1 (153904555-153904069)
	1-496, gnl\|Mm7\|chr3 (87653469-87653950)