Non-Coding RNA Search

Ss1.1-Pig1-119D13.5

Sequence:


               
               GACCTCAGCGGTTACCTCCCACAGGGCGTGGTGGACTCCTTCTTCCCCCGCAGCATGGCC
GGGTTTTACGCCAACCTGCAGAAAGCAGTGAAGAAATTCTATGGCTGACAGCTGGCTGGT
TGGCCGGCCAAGAACTCCTGTGACTCAGGCGGACCTGAAGTTGTCGGGACGCCTCCAGGG
AACCAGGCCGGTGGACAGTTCATCTCCAGGGACATCAGCCAGGGGCAGCCCGGCCCCTTG
GCTCCTCCTTCCACTTGGGGGGGGGCGGGATTGGTGGGGGAGGAGTCACTCCTTGCTGGC
CACGCCCCCTGTTATCCACACACTCCTCGCCCACAGGGTGGACCAGGATGCTGGCTTCTG
GACAGGGACTCAGCTGGGCACTTGGGCCTCTCTGTGCCGGTCTCTCTCAGACCACGTTTC
CCTGTTTGTGGAAAAGAATCACCATCCAGACCGAGAGCGCTCTTGTCTGTGCCACAGATC
CCCGGGCGCTCACTCCTGATGGCACTGTGCCAGATTTTCCCCCTTATAAATGTGTCCACT
TGGAAAGTGATGTTTAAAATATGAGAGAAGCATTTGCGAAAAGCACTTCCAGTAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACCTCAGCGGTTACCTCCCACAGGGCGTGGTGGACTCCTTCTTCCCCCGCAGCATGGCC
GGGTTTTACGCCAACCTGCAGAAAGCAGTGAAGAAATTCTATGGCTGACAGCTGGCTGGT
TGGCCGGCCAAGAACTCCTGTGACTCAGGCGGACCTGAAGTTGTCGGGACGCCTCCAGGG
AACCAGGCCGGTGGACAGTTCATCTCCAGGGACATCAGCCAGGGGCAGCCCGGCCCCTTG
GCTCCTCCTTCCACTTGGGGGGGGGCGGGATTGGTGGGGGAGGAGTCACTCCTTGCTGGC
CACGCCCCCTGTTATCCACACACTCCTCGCCCACAGGGTGGACCAGGATGCTGGCTTCTG
GACAGGGACTCAGCTGGGCACTTGGGCCTCTCTGTGCCGGTCTCTCTCAGACCACGTTTC
CCTGTTTGTGGAAAAGAATCACCATCCAGACCGAGAGCGCTCTTGTCTGTGCCACAGATC
CCCGGGCGCTCACTCCTGATGGCACTGTGCCAGATTTTCCCCCTTATAAATGTGTCCACT
TGGAAAGTGATGTTTAAAATATGAGAGAAGCATTTGCGAAAAGCACTTCCAGTAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-264, gnl|bosTau2|chr21 (19910412-19910138)
               

               
               1-264, gnl|Hg17|chr15 (79392759-79392457)
               

               
               1-264, gnl|Mm7|chr7 (79562042-79562333)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-264, gnl|bosTau2|chr21 (19910412-19910138)
               

               
               1-264, gnl|Hg17|chr15 (79392759-79392457)
               

               
               1-264, gnl|Mm7|chr7 (79562042-79562333)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               amn (0.417711)
               

               
               nbm (0.0993246)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               amn (0.417711)
               

               
               nbm (0.0993246)

	1-264, gnl\|bosTau2\|chr21 (19910412-19910138)
	1-264, gnl\|Hg17\|chr15 (79392759-79392457)
	1-264, gnl\|Mm7\|chr7 (79562042-79562333)