Ss1.1-Pig1-119G20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATCATAAAGGCCACGCCTACCGACGCTGTGACCGCAATGGCAGCTGGGAGCTGGTTCCC GGGCACAACCGGACATGGGCCAACTACAGCGAGTGTGTCAAGTTCCTGACCAATGAGACT CGTGAACGGGAGGTGTTTGACCGCCTGGGCATGATCTACACCGTGGGCTACTCCGTCTCG CTGGCCTCCCTCACCGTGGCTGTCCTCATTCTGGCCTACTTCAGGAGGCTGCACTGCACA CGCAACTACATCCACATGCACTTGTTCCTGTCCTTCATGCTGCGCGCTGTGAGCATCTTC GTCAAGGACGCGGTGCTCTACTCGGGCGCCACGCTCGATGAGGCTGAGCGCCTCACTGAG GAAGAGCTGCGCGCCATTGCCCAGGCACCGCTGCCACCTGTCGCCGCCACCAGCTACGTG GGCTGCCGGGTTGCTGTGACCTTCTTCCTTTACTTCCTGGCCACCAACTACTACTGGATT CTGGTGGAGGGGCTGTACCTGCACAGCCTCATCTTCATGGCCTTCTTCTCCGAGAAGAAG TACCTGTGGGGCTTTACAGTCTTCGGCTGGGGTCTGCCTGCCATCTTCGTGGCTGTGTGG GTCAGTGTGAGAGCCACTCTGGCAAACACCGGGTGCTGGGACTTGAGCTCTGGGAACAAG AAGTGGATCATCCAGGTGCCCATCCTGGCCTCCATTGTGCTCAACTTCATCCTCTTCATC AACATTGTCCGGGTCCTTGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACG CGGCAGCAGTACCGGAAGCTGCTCAAATCCACACTGGTGCTCATGCCGCTCTTTGGCGTC CATTACATCGTCTTCATGGCTACG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATCATAAAGGCCACGCCTACCGACGCTGTGACCGCAATGGCAGCTGGGAGCTGGTTCCC GGGCACAACCGGACATGGGCCAACTACAGCGAGTGTGTCAAGTTCCTGACCAATGAGACT CGTGAACGGGAGGTGTTTGACCGCCTGGGCATGATCTACACCGTGGGCTACTCCGTCTCG CTGGCCTCCCTCACCGTGGCTGTCCTCATTCTGGCCTACTTCAGGAGGCTGCACTGCACA CGCAACTACATCCACATGCACTTGTTCCTGTCCTTCATGCTGCGCGCTGTGAGCATCTTC GTCAAGGACGCGGTGCTCTACTCGGGCGCCACGCTCGATGAGGCTGAGCGCCTCACTGAG GAAGAGCTGCGCGCCATTGCCCAGGCACCGCTGCCACCTGTCGCCGCCACCAGCTACGTG GGCTGCCGGGTTGCTGTGACCTTCTTCCTTTACTTCCTGGCCACCAACTACTACTGGATT CTGGTGGAGGGGCTGTACCTGCACAGCCTCATCTTCATGGCCTTCTTCTCCGAGAAGAAG TACCTGTGGGGCTTTACAGTCTTCGGCTGGGGTCTGCCTGCCATCTTCGTGGCTGTGTGG GTCAGTGTGAGAGCCACTCTGGCAAACACCGGGTGCTGGGACTTGAGCTCTGGGAACAAG AAGTGGATCATCCAGGTGCCCATCCTGGCCTCCATTGTGCTCAACTTCATCCTCTTCATC AACATTGTCCGGGTCCTTGCCACCAAGCTGCGGGAGACCAACGCCGGCCGGTGTGACACG CGGCAGCAGTACCGGAAGCTGCTCAAATCCACACTGGTGCTCATGCCGCTCTTTGGCGTC CATTACATCGTCTTCATGGCTACG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 9-130, gnl|bosTau2|chr22 (40982710-40982831) | |
| 9-130, gnl|canFam2|chr20 (44909718-44909623) | |
| 9-130, gnl|danRer3|chr12 (5558393-5558299) | |
| 9-130, gnl|dasNov1|scaffold_74867 (1094-1189) | |
| 9-130, gnl|echTel1|scaffold_167334 (1861-1783) | |
| 9-130, gnl|fr1|chrUn (136979848-136979756) | |
| 9-130, gnl|galGal2|chr27 (1281418-1281323) | |
| 9-130, gnl|hg17|chr3 (46914566-46914661) | |
| 9-130, gnl|Hg17|chr3 (46914566-46914687) | |
| 9-130, gnl|loxAfr1|scaffold_126512 (5249-5154) | |
| 9-130, gnl|mm7|chr9 (110425502-110425407) | |
| 9-130, gnl|Mm7|chr9 (110425500-110425379) | |
| 9-130, gnl|monDom2|scaffold_5 (81047931-81048026) | |
| 9-130, gnl|oryCun1|scaffold_206213 (50130-50225) | |
| 9-130, gnl|panTro1|chr2_random (37762191-37762096) | |
| 9-130, gnl|rheMac2|chr2 (89641568-89641473) | |
| 9-130, gnl|rn3|chr8 (115124438-115124343) | |
| 9-130, gnl|tetNig1|chr15_random (1200603-1200511) | |
| 9-130, gnl|xenTro1|scaffold_221 (1536814-1536909) | |
| 219-427, gnl|bosTau2|chr22 (40983277-40983484) | |
| 219-427, gnl|Hg17|chr3 (46915150-46915360) | |
| 219-427, gnl|Mm7|chr9 (110424872-110424663) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 9-130, gnl|bosTau2|chr22 (40982710-40982831) | |
| 9-130, gnl|canFam2|chr20 (44909718-44909623) | |
| 9-130, gnl|danRer3|chr12 (5558393-5558299) | |
| 9-130, gnl|dasNov1|scaffold_74867 (1094-1189) | |
| 9-130, gnl|echTel1|scaffold_167334 (1861-1783) | |
| 9-130, gnl|fr1|chrUn (136979848-136979756) | |
| 9-130, gnl|galGal2|chr27 (1281418-1281323) | |
| 9-130, gnl|hg17|chr3 (46914566-46914661) | |
| 9-130, gnl|Hg17|chr3 (46914566-46914687) | |
| 9-130, gnl|loxAfr1|scaffold_126512 (5249-5154) | |
| 9-130, gnl|mm7|chr9 (110425502-110425407) | |
| 9-130, gnl|Mm7|chr9 (110425500-110425379) | |
| 9-130, gnl|monDom2|scaffold_5 (81047931-81048026) | |
| 9-130, gnl|oryCun1|scaffold_206213 (50130-50225) | |
| 9-130, gnl|panTro1|chr2_random (37762191-37762096) | |
| 9-130, gnl|rheMac2|chr2 (89641568-89641473) | |
| 9-130, gnl|rn3|chr8 (115124438-115124343) | |
| 9-130, gnl|tetNig1|chr15_random (1200603-1200511) | |
| 9-130, gnl|xenTro1|scaffold_221 (1536814-1536909) | |
| 219-427, gnl|bosTau2|chr22 (40983277-40983484) | |
| 219-427, gnl|Hg17|chr3 (46915150-46915360) | |
| 219-427, gnl|Mm7|chr9 (110424872-110424663) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nca (0.136874) | |
| nmm (0.132802) | |
| clu (0.119646) |