Ss1.1-Pig1-121A15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCTGGGTCCTTCCAGTCCCAGCCCGGTCCCAAGCCCTCCCTATACTCTAATGGGGTGTC GCCTGGCCTGCCAGACTCGCTTTGTGACTCGGAAGTGCGGCTGCCGAATGATGCATATGC CTGGCGGCGCGCCAGTGTGCAGCCCCCAGCAGTACAAGGACTGTGCCCACCCCGCGCTGG ACGCCATGCTGCGGCAGGACGTGTGCACCTGCCCCAACCCCTGCGCCACCACGCGCTACG CCAAGGAGCTCTCCATGGTGCGGATCCCGAGCCGCGCCTCTGCCCGCTACCTGGCCCGGA AGCACAACCGCAGCGAGGCCTACATCGAGGAGAACGTGCTAGTGCTGGACATCTTCTTCG AGGCCCTCAACTACGAGACGGTGGAGCAGAAGAAGGCCTACGAGGTGTCCGAGCTGCTAG GGGACATTGGGGGCCAGATGGGGCTGTTCATCGGGGCCAGCCTGCTCACTATCCTTGAGA TCTTGGACTTCCTCTGCGAGGTGTTCCGGGACCGAGTCCTGGGATACTTCTGGAAACGAA AGCGCTCCCAAAGGCACTCCAGCACCAATCTGCTTCAGGAAGGCCTGGGCAGCCATGGAA CCCAAGTTCCCCACCTCAGCCTGGGTCTCAGGCCTCCCCCTGCCGTCCCCAAGACGCTCT CTGCCTCCCACCGCACGGGCTACCTGGTCACCCAGCTCTAGACTCAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCTGGGTCCTTCCAGTCCCAGCCCGGTCCCAAGCCCTCCCTATACTCTAATGGGGTGTC GCCTGGCCTGCCAGACTCGCTTTGTGACTCGGAAGTGCGGCTGCCGAATGATGCATATGC CTGGCGGCGCGCCAGTGTGCAGCCCCCAGCAGTACAAGGACTGTGCCCACCCCGCGCTGG ACGCCATGCTGCGGCAGGACGTGTGCACCTGCCCCAACCCCTGCGCCACCACGCGCTACG CCAAGGAGCTCTCCATGGTGCGGATCCCGAGCCGCGCCTCTGCCCGCTACCTGGCCCGGA AGCACAACCGCAGCGAGGCCTACATCGAGGAGAACGTGCTAGTGCTGGACATCTTCTTCG AGGCCCTCAACTACGAGACGGTGGAGCAGAAGAAGGCCTACGAGGTGTCCGAGCTGCTAG GGGACATTGGGGGCCAGATGGGGCTGTTCATCGGGGCCAGCCTGCTCACTATCCTTGAGA TCTTGGACTTCCTCTGCGAGGTGTTCCGGGACCGAGTCCTGGGATACTTCTGGAAACGAA AGCGCTCCCAAAGGCACTCCAGCACCAATCTGCTTCAGGAAGGCCTGGGCAGCCATGGAA CCCAAGTTCCCCACCTCAGCCTGGGTCTCAGGCCTCCCCCTGCCGTCCCCAAGACGCTCT CTGCCTCCCACCGCACGGGCTACCTGGTCACCCAGCTCTAGACTCAGT |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 18-124, gnl|bosTau2|chr4 (64543454-64543348) | |
| 18-124, gnl|canFam2|chr16 (18050478-18050660) | |
| 18-124, gnl|danRer3|chrNA (101458018-101458152) | |
| 18-124, gnl|dasNov1|scaffold_139687 (2731-2913) | |
| 18-124, gnl|echTel1|scaffold_285380 (46155-46340) | |
| 18-124, gnl|fr1|chrUn (126255919-126256049) | |
| 18-124, gnl|galGal2|chrUn (6380868-6380723) | |
| 18-124, gnl|hg17|chr7 (150185521-150185697) | |
| 18-124, gnl|Hg17|chr7 (150185583-150185689) | |
| 18-124, gnl|loxAfr1|scaffold_23715 (15872-15690) | |
| 18-124, gnl|mm7|chr5 (23456621-23456791) | |
| 18-124, gnl|Mm7|chr5 (23456683-23456783) | |
| 18-124, gnl|monDom2|scaffold_7 (11193474-11193667) | |
| 18-124, gnl|oryCun1|scaffold_199766 (25672-25495) | |
| 18-124, gnl|panTro1|chr6_random (16740338-16740162) | |
| 18-124, gnl|rheMac2|chr3 (187997398-187997568) | |
| 18-124, gnl|rn3|chr4 (6127221-6127042) | |
| 18-124, gnl|tetNig1|chr15_random (921708-921838) | |
| 180-327, gnl|bosTau2|chr4 (64543087-64542940) | |
| 180-327, gnl|Hg17|chr7 (150185906-150186053) | |
| 180-327, gnl|Mm7|chr5 (23457029-23457176) | |
| 395-503, gnl|bosTau2|chr4 (64542480-64542370) | |
| 395-503, gnl|Hg17|chr7 (150186691-150186796) | |
| 395-503, gnl|Mm7|chr5 (23457591-23457694) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 18-124, gnl|bosTau2|chr4 (64543454-64543348) | |
| 18-124, gnl|canFam2|chr16 (18050478-18050660) | |
| 18-124, gnl|danRer3|chrNA (101458018-101458152) | |
| 18-124, gnl|dasNov1|scaffold_139687 (2731-2913) | |
| 18-124, gnl|echTel1|scaffold_285380 (46155-46340) | |
| 18-124, gnl|fr1|chrUn (126255919-126256049) | |
| 18-124, gnl|galGal2|chrUn (6380868-6380723) | |
| 18-124, gnl|hg17|chr7 (150185521-150185697) | |
| 18-124, gnl|Hg17|chr7 (150185583-150185689) | |
| 18-124, gnl|loxAfr1|scaffold_23715 (15872-15690) | |
| 18-124, gnl|mm7|chr5 (23456621-23456791) | |
| 18-124, gnl|Mm7|chr5 (23456683-23456783) | |
| 18-124, gnl|monDom2|scaffold_7 (11193474-11193667) | |
| 18-124, gnl|oryCun1|scaffold_199766 (25672-25495) | |
| 18-124, gnl|panTro1|chr6_random (16740338-16740162) | |
| 18-124, gnl|rheMac2|chr3 (187997398-187997568) | |
| 18-124, gnl|rn3|chr4 (6127221-6127042) | |
| 18-124, gnl|tetNig1|chr15_random (921708-921838) | |
| 180-327, gnl|bosTau2|chr4 (64543087-64542940) | |
| 180-327, gnl|Hg17|chr7 (150185906-150186053) | |
| 180-327, gnl|Mm7|chr5 (23457029-23457176) | |
| 395-503, gnl|bosTau2|chr4 (64542480-64542370) | |
| 395-503, gnl|Hg17|chr7 (150186691-150186796) | |
| 395-503, gnl|Mm7|chr5 (23457591-23457694) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cag (0.151194) |