Non-Coding RNA Search

Ss1.1-Pig1-121P09.5

Sequence:


               
               TTAATCCCAAAAAAGAAAGGCCTCCTCAACCTGCAGGTGGCCAAAAAGGCCCTCAGGTCC
TCCTTCCACCTCTAAATCCTCCTCTGGGCTCTGGAAAACCCTGTTCCGGAAAATGAGCAC
CCCACCTCCAGCTCCCCACAAGCCCCACAGCAATGATTTCCATGCACAGATGCTGCAGGC
ATGGCCCAGGCCTTAAAGTCTGTGTGTGGAACCATAGTCCTCTTCTCAACTGAGTAACCA
GAATCCTAGGCCTTTCACTCCCATTGGCCTTAGCCAGGATCCCCTTTTGGAAGAACATAC
TCAGGTCTTCCTAGGAATCCTTCCCCCATACTCCTTATAGCAGGTTGTGCCACCTACTGC
ATCTGGAGGCTGTGGAGAATTTAAGGTCTTGTGTAAGTGACTAAAGAGATCTGTTAAGAG
CTTTCTTCTCTTCCTACTTCCAACCCCCACCCCTCAGCAGTAATTGGAGAAATTCCCTGG
AGAAACCATTGGTTTTGACTTATGAGGCATTGGAGCTGTGCTGTTCAGTTGTAGCCATAT
TTTAAAGCAGCTAAATTTAAGCTATATTGAAAATTAAGTTCCTCAGTGAGATTAGCCACA
TTGTGCATATTCGTGTGGCTAGTGGGTTCTGTGGTAGCACAGACATGAGGAGGGAATTCT
ATCATAATGGAAAGTTCTGTTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAATCCCAAAAAAGAAAGGCCTCCTCAACCTGCAGGTGGCCAAAAAGGCCCTCAGGTCC
TCCTTCCACCTCTAAATCCTCCTCTGGGCTCTGGAAAACCCTGTTCCGGAAAATGAGCAC
CCCACCTCCAGCTCCCCACAAGCCCCACAGCAATGATTTCCATGCACAGATGCTGCAGGC
ATGGCCCAGGCCTTAAAGTCTGTGTGTGGAACCATAGTCCTCTTCTCAACTGAGTAACCA
GAATCCTAGGCCTTTCACTCCCATTGGCCTTAGCCAGGATCCCCTTTTGGAAGAACATAC
TCAGGTCTTCCTAGGAATCCTTCCCCCATACTCCTTATAGCAGGTTGTGCCACCTACTGC
ATCTGGAGGCTGTGGAGAATTTAAGGTCTTGTGTAAGTGACTAAAGAGATCTGTTAAGAG
CTTTCTTCTCTTCCTACTTCCAACCCCCACCCCTCAGCAGTAATTGGAGAAATTCCCTGG
AGAAACCATTGGTTTTGACTTATGAGGCATTGGAGCTGTGCTGTTCAGTTGTAGCCATAT
TTTAAAGCAGCTAAATTTAAGCTATATTGAAAATTAAGTTCCTCAGTGAGATTAGCCACA
TTGTGCATATTCGTGTGGCTAGTGGGTTCTGTGGTAGCACAGACATGAGGAGGGAATTCT
ATCATAATGGAAAGTTCTGTTGGG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               2-222, gnl|bosTau2|chr24 (14905160-14905376)
               

               
               2-222, gnl|Hg17|chr18 (32630893-32630665)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-222, gnl|bosTau2|chr24 (14905160-14905376)
               

               
               2-222, gnl|Hg17|chr18 (32630893-32630665)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               cty (0.10408)

	2-222, gnl\|bosTau2\|chr24 (14905160-14905376)
	2-222, gnl\|Hg17\|chr18 (32630893-32630665)