Ss1.1-Pig1-122I19.5
|
TTTTCCCCCTGGTGCTTCTCCTGGGTCTGGCCATCTCCGCCGTTCCTGTGCTATATGGCA
TCTTCGTGATCCCACCTTCTAAGCTGTGTGGTCCATTCCGGGGGCAGTTGTCCATCTGGT
CCGAGATCCCTAAGTCTATCGGAAGCCTCCCCGAGACTGCCCAGAATTTTCTCTTCTTCC
TGGGGACCCAGGCATTTGCTGTGCCCCTTCTGCTGTTATCCAGCATCCTGATGGCATATA
CTGTGGCCCTGGCTAACTCATATGGACGCCTCATCTCTGAGCTCAAACGCCAGATAGAGA
CGGAGGCACAGAATAAAGTCTTCCTGGCACAGCGCGCTGTGGCACTGAGCTCGGCCAACG
GAGCTCTTTGACCTTCCCAGCCTGGTTCAGGGTGACGACGTCTCGCTTTCAGACAGAGAC
CCACCCCCAGATCCTTTGAAGGTCTCGGCCGCGTCGTTTGGAAAATGAAAGAACTGGAGA
ACATCCCATGCCTTTCCAGCCCTGGGGGTCGCTGCCTCTCCAGTGAACCCCTTTCTTGTA
TCAATAAACACAACGGAGGCTGCTGAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTTCCCCCTGGTGCTTCTCCTGGGTCTGGCCATCTCCGCCGTTCCTGTGCTATATGGCA
TCTTCGTGATCCCACCTTCTAAGCTGTGTGGTCCATTCCGGGGGCAGTTGTCCATCTGGT
CCGAGATCCCTAAGTCTATCGGAAGCCTCCCCGAGACTGCCCAGAATTTTCTCTTCTTCC
TGGGGACCCAGGCATTTGCTGTGCCCCTTCTGCTGTTATCCAGCATCCTGATGGCATATA
CTGTGGCCCTGGCTAACTCATATGGACGCCTCATCTCTGAGCTCAAACGCCAGATAGAGA
CGGAGGCACAGAATAAAGTCTTCCTGGCACAGCGCGCTGTGGCACTGAGCTCGGCCAACG
GAGCTCTTTGACCTTCCCAGCCTGGTTCAGGGTGACGACGTCTCGCTTTCAGACAGAGAC
CCACCCCCAGATCCTTTGAAGGTCTCGGCCGCGTCGTTTGGAAAATGAAAGAACTGGAGA
ACATCCCATGCCTTTCCAGCCCTGGGGGTCGCTGCCTCTCCAGTGAACCCCTTTCTTGTA
TCAATAAACACAACGGAGGCTGCTGAAAAAAAAAAAAAAAAAAAAAAA
|
|
gi|61862904|ref|XP_590156.1| |
Protein identifier
|
gi|61862904|ref|XP_590156.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
62-223, gnl|bosTau2|chr18 (56105605-56105444) |
|
62-223, gnl|Hg17|chr19 (59356588-59356427) |
|
62-223, gnl|Mm7|chr7 (3289939-3289703) |
| |
|
302-515, gnl|bosTau2|chr18 (56105023-56104813) |
|
302-515, gnl|canFam2|chr1 (106129785-106129651) |
|
302-515, gnl|canFam2|chr1 (106129829-106129335) |
|
302-515, gnl|echTel1|scaffold_284539 (46332-46845) |
|
302-515, gnl|hg17|chr19 (59355669-59356157) |
|
302-515, gnl|Hg17|chr19 (59355924-59355731) |
|
302-515, gnl|hg17|chr8 (114128155-114128323) |
|
302-515, gnl|loxAfr1|scaffold_55084 (4689-4508) |
|
302-515, gnl|loxAfr1|scaffold_55084 (4738-4219) |
|
302-515, gnl|mm7|chr7 (3288756-3289172) |
|
302-515, gnl|monDom2|scaffold_191 (1308666-1308128) |
|
302-515, gnl|oryCun1|scaffold_160673 (631-254) |
|
302-515, gnl|panTro1|chr20 (56799115-56799604) |
|
302-515, gnl|panTro1|chr7 (116658268-116658433) |
|
302-515, gnl|rheMac2|chr19 (60261571-60262036) |
|
302-515, gnl|rheMac2|chr8 (115495904-115496072) |
|
302-515, gnl|rn3|chr1 (63941343-63940886) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
62-223, gnl|bosTau2|chr18 (56105605-56105444) |
|
62-223, gnl|Hg17|chr19 (59356588-59356427) |
|
62-223, gnl|Mm7|chr7 (3289939-3289703) |
| |
|
302-515, gnl|bosTau2|chr18 (56105023-56104813) |
|
302-515, gnl|canFam2|chr1 (106129785-106129651) |
|
302-515, gnl|canFam2|chr1 (106129829-106129335) |
|
302-515, gnl|echTel1|scaffold_284539 (46332-46845) |
|
302-515, gnl|hg17|chr19 (59355669-59356157) |
|
302-515, gnl|Hg17|chr19 (59355924-59355731) |
|
302-515, gnl|hg17|chr8 (114128155-114128323) |
|
302-515, gnl|loxAfr1|scaffold_55084 (4689-4508) |
|
302-515, gnl|loxAfr1|scaffold_55084 (4738-4219) |
|
302-515, gnl|mm7|chr7 (3288756-3289172) |
|
302-515, gnl|monDom2|scaffold_191 (1308666-1308128) |
|
302-515, gnl|oryCun1|scaffold_160673 (631-254) |
|
302-515, gnl|panTro1|chr20 (56799115-56799604) |
|
302-515, gnl|panTro1|chr7 (116658268-116658433) |
|
302-515, gnl|rheMac2|chr19 (60261571-60262036) |
|
302-515, gnl|rheMac2|chr8 (115495904-115496072) |
|
302-515, gnl|rn3|chr1 (63941343-63940886) |
|
duo (0.345602) |
|
nje (0.16592) |
|
jej (0.0989218) |
|
duo (0.345602) |
|
nje (0.16592) |
|
jej (0.0989218) |
