Non-Coding RNA Search

Ss1.1-Pig1-122P07.5

Sequence:


               
               GTTTTTCAAGGTCAGCTAAATATTGGAGATGATAGCCATGGTTAAGGACTTCAATATACT
TCCAAATATTGACTACGAGGACAAGAAGAAAATTGTGCTATTTTGAACAGATGAAAGATT
TGTGTGGTTCGAGGTAAACATTTGGGGGCAGTTAAATTCCATCCTACCACGTCATCCTTT
TGTATTTGGTCTCTTCTGAACACAGGTGGTCAGGGCATTCTGGCCATCACAGTTGGTTTT
GCAGTGGTCATTGCTTCCTGACTGCTCTCTAGATGTGCCCTGGATTTCTTCTGTACAAGC
GCTGTGCCTGTGTCTGTTAAGCAACATTGTTTTATTAACGAGAGGAGATGCTGTTAACAG
TAGCACGAAGTACAATTCTGTATTATAATTCTGAAGCTGCTGTTAATTTGTACAGTATAT
GGTAATCAAATGTACGCTGCAGAAGTTGGAGCAAGTGCCTACATTTTGCTATTTTTGGCA
TTACCTTGGAGCCATGTACAATAGAAGCAATGCAAGACTTGTAAACTCTTTGCCATTCCT
TAAGGAATATAAAATGTTTCCCCTCAGGTCCTTTTGCTGATGGGACACGTAAGTTGCCGC
CTCTCTGGGTTACGGAGATCCTCTGTTCTGGTATTTTCCTTTGATGTTTGGGACTACAGA
TAGTCAAGGGCTGGAAATTTTAGTTTTCAGGGGAAGGTTCGAGCTTCACAGTTTCGTTTG
TTTAAGACAATATTTCATTCCTAGTTCTGTTTGGGGGGGCAAATATTCATTTATCTAAAT
AAAATGTAATCTAATTAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTTCAAGGTCAGCTAAATATTGGAGATGATAGCCATGGTTAAGGACTTCAATATACT
TCCAAATATTGACTACGAGGACAAGAAGAAAATTGTGCTATTTTGAACAGATGAAAGATT
TGTGTGGTTCGAGGTAAACATTTGGGGGCAGTTAAATTCCATCCTACCACGTCATCCTTT
TGTATTTGGTCTCTTCTGAACACAGGTGGTCAGGGCATTCTGGCCATCACAGTTGGTTTT
GCAGTGGTCATTGCTTCCTGACTGCTCTCTAGATGTGCCCTGGATTTCTTCTGTACAAGC
GCTGTGCCTGTGTCTGTTAAGCAACATTGTTTTATTAACGAGAGGAGATGCTGTTAACAG
TAGCACGAAGTACAATTCTGTATTATAATTCTGAAGCTGCTGTTAATTTGTACAGTATAT
GGTAATCAAATGTACGCTGCAGAAGTTGGAGCAAGTGCCTACATTTTGCTATTTTTGGCA
TTACCTTGGAGCCATGTACAATAGAAGCAATGCAAGACTTGTAAACTCTTTGCCATTCCT
TAAGGAATATAAAATGTTTCCCCTCAGGTCCTTTTGCTGATGGGACACGTAAGTTGCCGC
CTCTCTGGGTTACGGAGATCCTCTGTTCTGGTATTTTCCTTTGATGTTTGGGACTACAGA
TAGTCAAGGGCTGGAAATTTTAGTTTTCAGGGGAAGGTTCGAGCTTCACAGTTTCGTTTG
TTTAAGACAATATTTCATTCCTAGTTCTGTTTGGGGGGGCAAATATTCATTTATCTAAAT
AAAATGTAATCTAATTAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-799, gnl|bosTau2|chr9 (52933057-52932273)
               

               
               2-799, gnl|Hg17|chr6 (151771016-151771785)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-799, gnl|bosTau2|chr9 (52933057-52932273)
               

               
               2-799, gnl|Hg17|chr6 (151771016-151771785)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               lin (0.291206)
               

               
               fbs (0.175346)
               

               
               bla (0.124347)
               

               
               spc (0.113366)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.291206)
               

               
               fbs (0.175346)
               

               
               bla (0.124347)
               

               
               spc (0.113366)

	2-799, gnl\|bosTau2\|chr9 (52933057-52932273)
	2-799, gnl\|Hg17\|chr6 (151771016-151771785)