Ss1.1-Pig1-123I17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATGGCAGCCATGGTCAAGAGGCAGAGGCCGAGGAGGCTATCCTGTTGGGCCTTGATGGC TGTGCTCTTGGCAGACCTGCTGGCGCTCAGTGACACACTGGCAGTGATGTCCGTGGACCT GGGCAGCGAGTCCATGAAGGTGGCCATTGTCAAACCTGGAGTGCCTATGGAGATTGTCTT GAACAAGGAATCCCGGAGGAAAACCCCAGTGACTGTGACCCTGAAAGAGAATGAAAGATT CTTTGGAGACAGTGCAGCAAGCATGGCCATCAAGAATCCAAAGGCTACACTGCGTTACTT CCAGCATCTCCTGGGGAAGCAGGAGAATAACCCCCATGTGGCTCTTTACAGAGCCCGTTT CCCAGAGCACGAGCTAGGCTTCGACCCACAGAGGCAGACTGTGTACTTCCAAATCAGCCC GCAGCTGCAGTTCTCACCTGAGGAGGTCCTCAGCATGCTTCTCAATTACTCGCGTTCTCT GGCTGAAGACTTTGCAGAGCAGCCCATCAAGGACGCAGTGATCACCGTGCCAGCCTTCTT CAATCAGGCGGAGCGCCGAGCTGTGCTGCAGGCTGCGCGCATGGCTGGCCTCAAGGTGCT GCAGCTCATCAATGACAACACAGCCACCGCCCTCAGCTACGGTGTCTTCCGCAGGAAAGA TATCAACACCACAGCCCAGAACATCATGTTCTACGATATGGGCGCGGGCAGCACCGTGTG CACCATCGTGACCTACCAGACAGTGAAGACAAAGGACTCGGGGGTGCAGCCACAGCTGCA GATCCGGGGAGTGGGGTTTGACCGCACCCTGGGGGGCCTGGAGATGGAGCTCCGGCTGCG TGAGCACCTGGCCAGGCTTTTCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATGGCAGCCATGGTCAAGAGGCAGAGGCCGAGGAGGCTATCCTGTTGGGCCTTGATGGC TGTGCTCTTGGCAGACCTGCTGGCGCTCAGTGACACACTGGCAGTGATGTCCGTGGACCT GGGCAGCGAGTCCATGAAGGTGGCCATTGTCAAACCTGGAGTGCCTATGGAGATTGTCTT GAACAAGGAATCCCGGAGGAAAACCCCAGTGACTGTGACCCTGAAAGAGAATGAAAGATT CTTTGGAGACAGTGCAGCAAGCATGGCCATCAAGAATCCAAAGGCTACACTGCGTTACTT CCAGCATCTCCTGGGGAAGCAGGAGAATAACCCCCATGTGGCTCTTTACAGAGCCCGTTT CCCAGAGCACGAGCTAGGCTTCGACCCACAGAGGCAGACTGTGTACTTCCAAATCAGCCC GCAGCTGCAGTTCTCACCTGAGGAGGTCCTCAGCATGCTTCTCAATTACTCGCGTTCTCT GGCTGAAGACTTTGCAGAGCAGCCCATCAAGGACGCAGTGATCACCGTGCCAGCCTTCTT CAATCAGGCGGAGCGCCGAGCTGTGCTGCAGGCTGCGCGCATGGCTGGCCTCAAGGTGCT GCAGCTCATCAATGACAACACAGCCACCGCCCTCAGCTACGGTGTCTTCCGCAGGAAAGA TATCAACACCACAGCCCAGAACATCATGTTCTACGATATGGGCGCGGGCAGCACCGTGTG CACCATCGTGACCTACCAGACAGTGAAGACAAAGGACTCGGGGGTGCAGCCACAGCTGCA GATCCGGGGAGTGGGGTTTGACCGCACCCTGGGGGGCCTGGAGATGGAGCTCCGGCTGCG TGAGCACCTGGCCAGGCTTTTCAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 68-187, gnl|bosTau2|chr15 (14251236-14251118) | |
| 68-187, gnl|canFam2|chr5 (17803556-17803445) | |
| 68-187, gnl|danRer3|chr1 (53321521-53321636) | |
| 68-187, gnl|dasNov1|scaffold_3723 (50490-50600) | |
| 68-187, gnl|echTel1|scaffold_311361 (90536-90646) | |
| 68-187, gnl|fr1|chrUn (249418026-249417913) | |
| 68-187, gnl|galGal2|chr24 (5331787-5331894) | |
| 68-187, gnl|hg17|chr11 (118431649-118431760) | |
| 68-187, gnl|Hg17|chr11 (118431789-118431671) | |
| 68-187, gnl|loxAfr1|scaffold_21399 (2623-2735) | |
| 68-187, gnl|mm7|chr9 (44315278-44315168) | |
| 68-187, gnl|Mm7|chr9 (44315126-44315255) | |
| 68-187, gnl|monDom2|scaffold_2 (119545767-119545656) | |
| 68-187, gnl|oryCun1|scaffold_161988 (432-542) | |
| 68-187, gnl|panTro1|chr9_random (4627260-4627149) | |
| 68-187, gnl|rheMac2|chr14 (117461497-117461608) | |
| 68-187, gnl|rn3|chr8 (47357033-47356923) | |
| 68-187, gnl|tetNig1|chr7 (1148559-1148649) | |
| 68-187, gnl|xenTro1|scaffold_18 (239867-239774) | |
| 265-421, gnl|bosTau2|chr15 (14250700-14250544) | |
| 265-421, gnl|Hg17|chr11 (118431262-118431106) | |
| 265-421, gnl|Mm7|chr9 (44315598-44315754) | |
| 490-679, gnl|bosTau2|chr15 (14249912-14249723) | |
| 490-679, gnl|Hg17|chr11 (118430605-118430416) | |
| 490-679, gnl|Mm7|chr9 (44316179-44316368) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 68-187, gnl|bosTau2|chr15 (14251236-14251118) | |
| 68-187, gnl|canFam2|chr5 (17803556-17803445) | |
| 68-187, gnl|danRer3|chr1 (53321521-53321636) | |
| 68-187, gnl|dasNov1|scaffold_3723 (50490-50600) | |
| 68-187, gnl|echTel1|scaffold_311361 (90536-90646) | |
| 68-187, gnl|fr1|chrUn (249418026-249417913) | |
| 68-187, gnl|galGal2|chr24 (5331787-5331894) | |
| 68-187, gnl|hg17|chr11 (118431649-118431760) | |
| 68-187, gnl|Hg17|chr11 (118431789-118431671) | |
| 68-187, gnl|loxAfr1|scaffold_21399 (2623-2735) | |
| 68-187, gnl|mm7|chr9 (44315278-44315168) | |
| 68-187, gnl|Mm7|chr9 (44315126-44315255) | |
| 68-187, gnl|monDom2|scaffold_2 (119545767-119545656) | |
| 68-187, gnl|oryCun1|scaffold_161988 (432-542) | |
| 68-187, gnl|panTro1|chr9_random (4627260-4627149) | |
| 68-187, gnl|rheMac2|chr14 (117461497-117461608) | |
| 68-187, gnl|rn3|chr8 (47357033-47356923) | |
| 68-187, gnl|tetNig1|chr7 (1148559-1148649) | |
| 68-187, gnl|xenTro1|scaffold_18 (239867-239774) | |
| 265-421, gnl|bosTau2|chr15 (14250700-14250544) | |
| 265-421, gnl|Hg17|chr11 (118431262-118431106) | |
| 265-421, gnl|Mm7|chr9 (44315598-44315754) | |
| 490-679, gnl|bosTau2|chr15 (14249912-14249723) | |
| 490-679, gnl|Hg17|chr11 (118430605-118430416) | |
| 490-679, gnl|Mm7|chr9 (44316179-44316368) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) |