Ss1.1-Pig1-123M16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCTGCGGCCCCACGAGATCAACTGCTCTGTCTTCAGGGACCACAGCGCGTCCTGGTCCG TGTTCCACACTCTCCGGCCCTCGGACATCCTGCAGGGGCTCCTGGGGAACTGCTGGTTCT TGAGTGCCCTGGCGGTGCTGGCCGAGCGGCCAGACCTGGTTGAGCGGGTGATGGTCACGC GCAGCCTGTGTGCGGAGGGCGCCTACCAGGTGCGGCTCTGCAAGGACGGCACGTGGACGA CGGTGCTGGTGGACGACATGCTGCCCTGCGATGAGGCCGGCTGCCTCCTCTTCTCCCAGG CTCAGCGCAAGCAGCTGTGGGTGGCCCTCATCGAGAAGGCACTGGCCAAGCTGCATGGCT CCTACTTTGCCCTCCAGGCAGGGCGCGCCATCGAGGGCCTGGCCACGCTCACCGGCGCTC CCTGTGAGAGCCTGGCGCTGCAGGTCAGCTCCACTAACCCCCGTGAGGAGCCCGTTGACA CTGACCTCATCTGGGCCAAAATGCTGAGTTCGAAGGAGGCTGGGTTCCTCATGGGCGCCT CCTGCGGAGGCGGCAACATGAAGGTGGACGACGTGGCCTACGAGAGCCTGGGCCTGCGCC CCCGCCACGCCTACTCCGTCCTGGACGTGCGTGACGTCCAGGGCTCCAGGCTTTTGCGCC TCCGGAACCCGTGGGGCCGCTTCTCCTGGAATGGCAGCTGGTCCGATGAGTGGCCGCACT GGCCAGGGCACCTTCGAAGCGAGCTCATGCCACACGGCAGCAGCGAGGGCGTCTTCTGGA TGGAGTACAGCGACTTTGTCAGGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCTGCGGCCCCACGAGATCAACTGCTCTGTCTTCAGGGACCACAGCGCGTCCTGGTCCG TGTTCCACACTCTCCGGCCCTCGGACATCCTGCAGGGGCTCCTGGGGAACTGCTGGTTCT TGAGTGCCCTGGCGGTGCTGGCCGAGCGGCCAGACCTGGTTGAGCGGGTGATGGTCACGC GCAGCCTGTGTGCGGAGGGCGCCTACCAGGTGCGGCTCTGCAAGGACGGCACGTGGACGA CGGTGCTGGTGGACGACATGCTGCCCTGCGATGAGGCCGGCTGCCTCCTCTTCTCCCAGG CTCAGCGCAAGCAGCTGTGGGTGGCCCTCATCGAGAAGGCACTGGCCAAGCTGCATGGCT CCTACTTTGCCCTCCAGGCAGGGCGCGCCATCGAGGGCCTGGCCACGCTCACCGGCGCTC CCTGTGAGAGCCTGGCGCTGCAGGTCAGCTCCACTAACCCCCGTGAGGAGCCCGTTGACA CTGACCTCATCTGGGCCAAAATGCTGAGTTCGAAGGAGGCTGGGTTCCTCATGGGCGCCT CCTGCGGAGGCGGCAACATGAAGGTGGACGACGTGGCCTACGAGAGCCTGGGCCTGCGCC CCCGCCACGCCTACTCCGTCCTGGACGTGCGTGACGTCCAGGGCTCCAGGCTTTTGCGCC TCCGGAACCCGTGGGGCCGCTTCTCCTGGAATGGCAGCTGGTCCGATGAGTGGCCGCACT GGCCAGGGCACCTTCGAAGCGAGCTCATGCCACACGGCAGCAGCGAGGGCGTCTTCTGGA TGGAGTACAGCGACTTTGTCAGGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-117, gnl|bosTau2|chr25 (1333009-1332893) | |
| 1-117, gnl|canFam2|chr6 (43042271-43042054) | |
| 1-117, gnl|danRer3|chr9 (5225995-5225779) | |
| 1-117, gnl|echTel1|scaffold_155765 (4075-3864) | |
| 1-117, gnl|fr1|chrUn (21731096-21730877) | |
| 1-117, gnl|galGal2|chr14 (1668916-1668699) | |
| 1-117, gnl|hg17|chr16 (538992-539209) | |
| 1-117, gnl|Hg17|chr16 (539088-539204) | |
| 1-117, gnl|mm7|chr17 (24146699-24146482) | |
| 1-117, gnl|Mm7|chr17 (24146601-24146485) | |
| 1-117, gnl|monDom2|scaffold_49 (9264430-9264647) | |
| 1-117, gnl|rheMac2|chr20 (534632-534849) | |
| 1-117, gnl|rn3|chr10 (15223574-15223357) | |
| 1-117, gnl|tetNig1|chr2 (5220357-5220576) | |
| 1-117, gnl|xenTro1|scaffold_12 (3219145-3219362) | |
| 169-525, gnl|bosTau2|chr25 (1332686-1332335) | |
| 169-525, gnl|Hg17|chr16 (539420-539841) | |
| 169-525, gnl|Mm7|chr17 (24146254-24145909) | |
| 647-804, gnl|bosTau2|chr25 (1331467-1331310) | |
| 647-804, gnl|Hg17|chr16 (541510-541667) | |
| 647-804, gnl|Mm7|chr17 (24145115-24144958) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-117, gnl|bosTau2|chr25 (1333009-1332893) | |
| 1-117, gnl|canFam2|chr6 (43042271-43042054) | |
| 1-117, gnl|danRer3|chr9 (5225995-5225779) | |
| 1-117, gnl|echTel1|scaffold_155765 (4075-3864) | |
| 1-117, gnl|fr1|chrUn (21731096-21730877) | |
| 1-117, gnl|galGal2|chr14 (1668916-1668699) | |
| 1-117, gnl|hg17|chr16 (538992-539209) | |
| 1-117, gnl|Hg17|chr16 (539088-539204) | |
| 1-117, gnl|mm7|chr17 (24146699-24146482) | |
| 1-117, gnl|Mm7|chr17 (24146601-24146485) | |
| 1-117, gnl|monDom2|scaffold_49 (9264430-9264647) | |
| 1-117, gnl|rheMac2|chr20 (534632-534849) | |
| 1-117, gnl|rn3|chr10 (15223574-15223357) | |
| 1-117, gnl|tetNig1|chr2 (5220357-5220576) | |
| 1-117, gnl|xenTro1|scaffold_12 (3219145-3219362) | |
| 169-525, gnl|bosTau2|chr25 (1332686-1332335) | |
| 169-525, gnl|Hg17|chr16 (539420-539841) | |
| 169-525, gnl|Mm7|chr17 (24146254-24145909) | |
| 647-804, gnl|bosTau2|chr25 (1331467-1331310) | |
| 647-804, gnl|Hg17|chr16 (541510-541667) | |
| 647-804, gnl|Mm7|chr17 (24145115-24144958) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |