Non-Coding RNA Search

Ss1.1-Pig1-125O09.5

Sequence:


               
               ACAACCTCCACGGAGCCTTCCAGCAGCTGCAGCTCCTGGGCCAGTTCTGCCAGGAGCAGG
GCATCCCTGTTCCCACCCATCTCGCCCAGCCCGGAGGAACAGTGCCAGCCCCAGGAGTGC
CACCTCTTCTTGGACCCCGCCTGCCCTGATGCCCCCGCTGTGCTGCACTTCCCTCTGGTC
AATGCCTCCTTCCGGGAGCACTCAGCCCCTGGAGTCCGGCGGACAGCGGAGGAGCAGGAG
GCAGGGCAAGTGAACCTCTCTTCCTCCGACTCCCCCTACCACTTCTCGAAGGTGACCTAC
AGCCAGGAGGACACAGACAAGCTGCTCCGTCTGACGCAGTACAACATCTGCAACAACCGG
GAGCGGCTGCTGGAGGCCCTTCGTGAGGCTGTGCAGCGGCGGAGGCAGCGCCGGCCCGAG
TGACAAGCAGTGAATGGGGGTGGGGATGCTGTGACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAACCTCCACGGAGCCTTCCAGCAGCTGCAGCTCCTGGGCCAGTTCTGCCAGGAGCAGG
GCATCCCTGTTCCCACCCATCTCGCCCAGCCCGGAGGAACAGTGCCAGCCCCAGGAGTGC
CACCTCTTCTTGGACCCCGCCTGCCCTGATGCCCCCGCTGTGCTGCACTTCCCTCTGGTC
AATGCCTCCTTCCGGGAGCACTCAGCCCCTGGAGTCCGGCGGACAGCGGAGGAGCAGGAG
GCAGGGCAAGTGAACCTCTCTTCCTCCGACTCCCCCTACCACTTCTCGAAGGTGACCTAC
AGCCAGGAGGACACAGACAAGCTGCTCCGTCTGACGCAGTACAACATCTGCAACAACCGG
GAGCGGCTGCTGGAGGCCCTTCGTGAGGCTGTGCAGCGGCGGAGGCAGCGCCGGCCCGAG
TGACAAGCAGTGAATGGGGGTGGGGATGCTGTGACT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               16-212, gnl|bosTau2|chr10 (25106737-25106542)
               

               
               16-212, gnl|Hg17|chr15 (39926819-39927014)
               

               
               16-212, gnl|Mm7|chr2 (119781962-119782157)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-212, gnl|bosTau2|chr10 (25106737-25106542)
               

               
               16-212, gnl|Hg17|chr15 (39926819-39927014)
               

               
               16-212, gnl|Mm7|chr2 (119781962-119782157)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (0.183925)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	16-212, gnl\|bosTau2\|chr10 (25106737-25106542)
	16-212, gnl\|Hg17\|chr15 (39926819-39927014)
	16-212, gnl\|Mm7\|chr2 (119781962-119782157)