Non-Coding RNA Search

Ss1.1-Pig1-126J13.5

Sequence:


               
               GTGTTTTTTCACATGGTAAGGCAGTGTTTTATGAAACGCAACGCCATGCTGGTAGACCAT
TTACGTTCATTGAGTCCAATTGATGCATTGCATATAATGAACCAAATGAGAAAAAAACAC
AGTATGAAAATAGTAGATATGTACCCTGAAGACTTTCAGCGTCTCTTTGAAATTATAGAA
TGTTCCAAAGATGGTGCCTGTAGGTGGCTATATGATGACTTCATGGAAGATACACTCACA
TAGGAAGTGGACTGCTAAGCCATTTATTGGAGCTTTTTGTTTATTTGGAATTATGACACA
AATGAAAAAGAACCGAGCTGGAAAAGCTCACAGCCTTTCAACAGAAGATAACTTCTTGTT
TTGCGCAACTGAGCAGATAATTTCTTCTGCAGTCGATACCATTAGTGTATTGGATGAAAT
AATAGCTGCTGTTTTATTTAAACTGAATAAAATGAAGACTTCAGTTCATTGTGGATTTGA
TCAAATTAGATTTGTCTTGGAGTTCCCAACATGGCTCAATGGAAACGAATCTGACTAGCA
TCCATGAGGATGTAGGTTTGATCCCTGGACTTGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGTTTTTTCACATGGTAAGGCAGTGTTTTATGAAACGCAACGCCATGCTGGTAGACCAT
TTACGTTCATTGAGTCCAATTGATGCATTGCATATAATGAACCAAATGAGAAAAAAACAC
AGTATGAAAATAGTAGATATGTACCCTGAAGACTTTCAGCGTCTCTTTGAAATTATAGAA
TGTTCCAAAGATGGTGCCTGTAGGTGGCTATATGATGACTTCATGGAAGATACACTCACA
TAGGAAGTGGACTGCTAAGCCATTTATTGGAGCTTTTTGTTTATTTGGAATTATGACACA
AATGAAAAAGAACCGAGCTGGAAAAGCTCACAGCCTTTCAACAGAAGATAACTTCTTGTT
TTGCGCAACTGAGCAGATAATTTCTTCTGCAGTCGATACCATTAGTGTATTGGATGAAAT
AATAGCTGCTGTTTTATTTAAACTGAATAAAATGAAGACTTCAGTTCATTGTGGATTTGA
TCAAATTAGATTTGTCTTGGAGTTCCCAACATGGCTCAATGGAAACGAATCTGACTAGCA
TCCATGAGGATGTAGGTTTGATCCCTGGACTTGCTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               67-499, gnl|bosTau2|chr16 (19437815-19437391)
               

               
               67-499, gnl|Hg17|chr1 (243030544-243030126)
               

               
               67-499, gnl|Mm7|chr1 (179509428-179508998)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               67-499, gnl|bosTau2|chr16 (19437815-19437391)
               

               
               67-499, gnl|Hg17|chr1 (243030544-243030126)
               

               
               67-499, gnl|Mm7|chr1 (179509428-179508998)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               lin (0.145603)
               

               
               pty (0.142714)
               

               
               thg (0.126791)
               

               
               bla (0.124347)
               

               
               tra (0.123092)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)
               

               
               pty (0.142714)
               

               
               thg (0.126791)
               

               
               bla (0.124347)
               

               
               tra (0.123092)

	67-499, gnl\|bosTau2\|chr16 (19437815-19437391)
	67-499, gnl\|Hg17\|chr1 (243030544-243030126)
	67-499, gnl\|Mm7\|chr1 (179509428-179508998)

	lin (0.145603)
	pty (0.142714)
	thg (0.126791)
	bla (0.124347)
	tra (0.123092)