Non-Coding RNA Search

Ss1.1-Pig1-126L08.5

Sequence:


               
               TCTTTTCCCTGGCTCTTCGGCCTCCCCATTTCTCCCCTCACTCTGTGCTATTTCTGCCTG
TCCTTTCTTCCCATCCCCATACTTCCAACCTTTCCCATCTTCTCCCCAAACACATCCACA
CCATGTCATTGTTCTCAATTCCTATTTTCCATCTAATCTCACCTCTGAAATTTGTCCTCA
TTGTCCCCTTTCTCACACCCCCCCCTTCTCCTTCATTGGCCCAGTACCTCATCACTGCCT
GTCTAGAAACGGCCAAGTCTACCTCTGGGGGGACACCCAGCTCGGCCCCCACAGACCTGC
CTGCCCCCTTCTCGCCACCCCTGACGGCCCTGCCCACAGCTCCCCCAGGCCTGCTGGGCA
CGCCCTATGCCATCTCCCTCTCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTTTCCCTGGCTCTTCGGCCTCCCCATTTCTCCCCTCACTCTGTGCTATTTCTGCCTG
TCCTTTCTTCCCATCCCCATACTTCCAACCTTTCCCATCTTCTCCCCAAACACATCCACA
CCATGTCATTGTTCTCAATTCCTATTTTCCATCTAATCTCACCTCTGAAATTTGTCCTCA
TTGTCCCCTTTCTCACACCCCCCCCTTCTCCTTCATTGGCCCAGTACCTCATCACTGCCT
GTCTAGAAACGGCCAAGTCTACCTCTGGGGGGACACCCAGCTCGGCCCCCACAGACCTGC
CTGCCCCCTTCTCGCCACCCCTGACGGCCCTGCCCACAGCTCCCCCAGGCCTGCTGGGCA
CGCCCTATGCCATCTCCCTCTCCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-384, gnl|bosTau2|chr22 (36468347-36467958)
               

               
               1-384, gnl|Hg17|chr3 (51967629-51967263)
               

               
               1-384, gnl|Mm7|chr9 (106192308-106192721)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-384, gnl|bosTau2|chr22 (36468347-36467958)
               

               
               1-384, gnl|Hg17|chr3 (51967629-51967263)
               

               
               1-384, gnl|Mm7|chr9 (106192308-106192721)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               mcp (0.170648)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)
               

               
               eru (0.120048)

	1-384, gnl\|bosTau2\|chr22 (36468347-36467958)
	1-384, gnl\|Hg17\|chr3 (51967629-51967263)
	1-384, gnl\|Mm7\|chr9 (106192308-106192721)