Ss1.1-Pig1-127P04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGTGCTCAAGGACATCCTTGTCCCCAATCTGCAGTGGCACGCTGGCAGGACAGCCGCGGC CATTCGCACAGCGGCCGTGTCCTGCCTCTGGGCCCTCGTCAGCAGCGGGGTCCTGTCGGA CAAGCAGGTACAGGAGGTGCAGGAAACGCTGATGCCTCAGGTTCTCACCACCCTGGAGGA GGATTCTCAGACGGCGCGATTACTCTCATGCCGGATCGTTGGCGTGTTTCTGAAAGCCTC GGATGGTGCGACTGAGCCTGACAAATTCATCAAGATTTATCCCGAACTCCTAAAACGCCT GGATGACGTCTCCAACGAGGTGAGGCTGGCGGCCACCTCCACCCTGGTCACCTGGCTGGA GCGCATCCGGAACGAGGCCGGGCAGTGCTGTTACCGGAGCAGCGTCCAGCACCTGTACAG GGAGCTCCTCGTGTACCTCGACGACCCCGAGCGCGCCGTCCAGGACGCCGTTCTCGAGGC CCTCAAAGCTGGCAGCGTCCTGTTCCCCGACGTCCTGGTGAGAGAGACGGAGGCCGCCCT CCACAGGCATCGCTCCCCCGCCTACTGCGAGCAGCTCCTCCGGCACCTGCAGGCCGCGCC GCCCGCGCAGTGACCGCAGTTCTGGGCACAGAGCCTTCGGCTCGGCAGCCGGAGGTGAGA GCCACCGCCGGGCCCTGTCCTCCCCTAGAGCAGGGGTGGGGCCTTCGCGTCTCAGCCGCG GACACCGAGAAGCCAGCCTTGGTTTCCTGAGCGACAGGTTTTCAGACCCCGAGTTCCCGA AATGAGCCGCACTGTGGCTTCCGTGTCTTTACGTCCTGCTGACGCAGGTCGCTGAGAGGC CTGCCACCCGCCTGCAGCTGATGCCCAGTTACATGCTGGCTTCTCCAGACGCAGCCGCGT CAGGCCTCTCTGTCAGGCTCCGCGCACTGCTAGGTTCACGGATTATCAGTTCCTTCTGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGTGCTCAAGGACATCCTTGTCCCCAATCTGCAGTGGCACGCTGGCAGGACAGCCGCGGC CATTCGCACAGCGGCCGTGTCCTGCCTCTGGGCCCTCGTCAGCAGCGGGGTCCTGTCGGA CAAGCAGGTACAGGAGGTGCAGGAAACGCTGATGCCTCAGGTTCTCACCACCCTGGAGGA GGATTCTCAGACGGCGCGATTACTCTCATGCCGGATCGTTGGCGTGTTTCTGAAAGCCTC GGATGGTGCGACTGAGCCTGACAAATTCATCAAGATTTATCCCGAACTCCTAAAACGCCT GGATGACGTCTCCAACGAGGTGAGGCTGGCGGCCACCTCCACCCTGGTCACCTGGCTGGA GCGCATCCGGAACGAGGCCGGGCAGTGCTGTTACCGGAGCAGCGTCCAGCACCTGTACAG GGAGCTCCTCGTGTACCTCGACGACCCCGAGCGCGCCGTCCAGGACGCCGTTCTCGAGGC CCTCAAAGCTGGCAGCGTCCTGTTCCCCGACGTCCTGGTGAGAGAGACGGAGGCCGCCCT CCACAGGCATCGCTCCCCCGCCTACTGCGAGCAGCTCCTCCGGCACCTGCAGGCCGCGCC GCCCGCGCAGTGACCGCAGTTCTGGGCACAGAGCCTTCGGCTCGGCAGCCGGAGGTGAGA GCCACCGCCGGGCCCTGTCCTCCCCTAGAGCAGGGGTGGGGCCTTCGCGTCTCAGCCGCG GACACCGAGAAGCCAGCCTTGGTTTCCTGAGCGACAGGTTTTCAGACCCCGAGTTCCCGA AATGAGCCGCACTGTGGCTTCCGTGTCTTTACGTCCTGCTGACGCAGGTCGCTGAGAGGC CTGCCACCCGCCTGCAGCTGATGCCCAGTTACATGCTGGCTTCTCCAGACGCAGCCGCGT CAGGCCTCTCTGTCAGGCTCCGCGCACTGCTAGGTTCACGGATTATCAGTTCCTTCTGAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 66 entry(ies) | More info |
| Aligned organism(s): 66 entry(ies) | Help | Less info |
| 3-130, gnl|bosTau2|chr25 (40403368-40403495) | |
| 3-130, gnl|canFam2|chr6 (19097571-19097415) | |
| 3-130, gnl|canFam2|chr6 (19097422-19097571) | |
| 3-130, gnl|canFam2|chr6 (19097408-19097535) | |
| 3-130, gnl|dasNov1|scaffold_190460 (477-635) | |
| 3-130, gnl|dasNov1|scaffold_190460 (639-513) | |
| 3-130, gnl|dasNov1|scaffold_33912 (14791-14643) | |
| 3-130, gnl|echTel1|scaffold_187247 (2474-2316) | |
| 3-130, gnl|echTel1|scaffold_187247 (2322-2474) | |
| 3-130, gnl|echTel1|scaffold_187247 (2309-2438) | |
| 3-130, gnl|hg17|chr4 (68414545-68414665) | |
| 3-130, gnl|hg17|chr7 (586844-587002) | |
| 3-130, gnl|Hg17|chr7 (586871-586998) | |
| 3-130, gnl|hg17|chr7_random (528408-528537) | |
| 3-130, gnl|loxAfr1|scaffold_18366 (44953-44795) | |
| 3-130, gnl|loxAfr1|scaffold_18366 (44801-44947) | |
| 3-130, gnl|loxAfr1|scaffold_18366 (44788-44917) | |
| 3-130, gnl|mm7|chr5 (138150024-138150182) | |
| 3-130, gnl|mm7|chr5 (138150176-138150037) | |
| 3-130, gnl|mm7|chr5 (138150182-138150060) | |
| 3-130, gnl|Mm7|chr5 (138150051-138150178) | |
| 3-130, gnl|panTro1|chr3 (78074528-78074407) | |
| 3-130, gnl|panTro1|chr6 (618392-618550) | |
| 3-130, gnl|panTro1|chr6 (618557-618428) | |
| 3-130, gnl|rheMac2|chr3 (38702901-38703059) | |
| 3-130, gnl|rheMac2|chr3 (38703053-38702913) | |
| 3-130, gnl|rheMac2|chr3 (38703066-38702937) | |
| 3-130, gnl|rn3|chr12 (15996472-15996314) | |
| 3-130, gnl|rn3|chr12 (15996314-15996436) | |
| 3-130, gnl|tetNig1|chr3 (9699790-9699686) | |
| 3-130, gnl|xenTro1|scaffold_254 (1487991-1487833) | |
| 3-130, gnl|xenTro1|scaffold_254 (1487833-1487955) | |
| 281-474, gnl|bosTau2|chr25 (40405796-40405989) | |
| 281-474, gnl|canFam2|chr6 (19094006-19093782) | |
| 281-474, gnl|canFam2|chr6 (19093782-19094006) | |
| 281-474, gnl|dasNov1|scaffold_190460 (3673-3902) | |
| 281-474, gnl|dasNov1|scaffold_190460 (3902-3673) | |
| 281-474, gnl|echTel1|scaffold_187247 (970-765) | |
| 281-474, gnl|echTel1|scaffold_187247 (765-970) | |
| 281-474, gnl|hg17|chr7 (592727-592956) | |
| 281-474, gnl|Hg17|chr7 (592741-592934) | |
| 281-474, gnl|hg17|chr7_random (522456-522685) | |
| 281-474, gnl|loxAfr1|scaffold_18366 (40195-39962) | |
| 281-474, gnl|loxAfr1|scaffold_18366 (39962-40195) | |
| 281-474, gnl|mm7|chr5 (138156622-138156835) | |
| 281-474, gnl|mm7|chr5 (138156835-138156622) | |
| 281-474, gnl|Mm7|chr5 (138156631-138156827) | |
| 281-474, gnl|monDom2|scaffold_19 (49762347-49762137) | |
| 281-474, gnl|panTro1|chr6 (624586-624912) | |
| 281-474, gnl|panTro1|chr6 (624912-624586) | |
| 281-474, gnl|rheMac2|chr3 (38708870-38709098) | |
| 281-474, gnl|rheMac2|chr3 (38709098-38708872) | |
| 281-474, gnl|rn3|chr12 (15988434-15988209) | |
| 281-474, gnl|rn3|chr12 (15988209-15988434) | |
| 281-474, gnl|xenTro1|scaffold_254 (1485093-1484893) | |
| 281-474, gnl|xenTro1|scaffold_254 (1484893-1485093) | |
| 476-713, gnl|bosTau2|chr25 (40408898-40409134) | |
| 476-713, gnl|canFam2|chr6 (19086652-19086754) | |
| 476-713, gnl|Hg17|chr7 (598394-598599) | |
| 476-713, gnl|hg17|chr7_random (516885-517014) | |
| 476-713, gnl|loxAfr1|scaffold_18366 (37947-38095) | |
| 476-713, gnl|mm7|chr5 (138157818-138157709) | |
| 476-713, gnl|monDom2|scaffold_19 (49763946-49763778) | |
| 476-713, gnl|panTro1|chr6 (630474-630345) | |
| 476-713, gnl|rheMac2|chr3 (38714101-38713972) | |
| 476-713, gnl|rn3|chr12 (15986701-15986809) |
| Aligned organism(s): 66 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-130, gnl|bosTau2|chr25 (40403368-40403495) | |
| 3-130, gnl|canFam2|chr6 (19097571-19097415) | |
| 3-130, gnl|canFam2|chr6 (19097422-19097571) | |
| 3-130, gnl|canFam2|chr6 (19097408-19097535) | |
| 3-130, gnl|dasNov1|scaffold_190460 (477-635) | |
| 3-130, gnl|dasNov1|scaffold_190460 (639-513) | |
| 3-130, gnl|dasNov1|scaffold_33912 (14791-14643) | |
| 3-130, gnl|echTel1|scaffold_187247 (2474-2316) | |
| 3-130, gnl|echTel1|scaffold_187247 (2322-2474) | |
| 3-130, gnl|echTel1|scaffold_187247 (2309-2438) | |
| 3-130, gnl|hg17|chr4 (68414545-68414665) | |
| 3-130, gnl|hg17|chr7 (586844-587002) | |
| 3-130, gnl|Hg17|chr7 (586871-586998) | |
| 3-130, gnl|hg17|chr7_random (528408-528537) | |
| 3-130, gnl|loxAfr1|scaffold_18366 (44953-44795) | |
| 3-130, gnl|loxAfr1|scaffold_18366 (44801-44947) | |
| 3-130, gnl|loxAfr1|scaffold_18366 (44788-44917) | |
| 3-130, gnl|mm7|chr5 (138150024-138150182) | |
| 3-130, gnl|mm7|chr5 (138150176-138150037) | |
| 3-130, gnl|mm7|chr5 (138150182-138150060) | |
| 3-130, gnl|Mm7|chr5 (138150051-138150178) | |
| 3-130, gnl|panTro1|chr3 (78074528-78074407) | |
| 3-130, gnl|panTro1|chr6 (618392-618550) | |
| 3-130, gnl|panTro1|chr6 (618557-618428) | |
| 3-130, gnl|rheMac2|chr3 (38702901-38703059) | |
| 3-130, gnl|rheMac2|chr3 (38703053-38702913) | |
| 3-130, gnl|rheMac2|chr3 (38703066-38702937) | |
| 3-130, gnl|rn3|chr12 (15996472-15996314) | |
| 3-130, gnl|rn3|chr12 (15996314-15996436) | |
| 3-130, gnl|tetNig1|chr3 (9699790-9699686) | |
| 3-130, gnl|xenTro1|scaffold_254 (1487991-1487833) | |
| 3-130, gnl|xenTro1|scaffold_254 (1487833-1487955) | |
| 281-474, gnl|bosTau2|chr25 (40405796-40405989) | |
| 281-474, gnl|canFam2|chr6 (19094006-19093782) | |
| 281-474, gnl|canFam2|chr6 (19093782-19094006) | |
| 281-474, gnl|dasNov1|scaffold_190460 (3673-3902) | |
| 281-474, gnl|dasNov1|scaffold_190460 (3902-3673) | |
| 281-474, gnl|echTel1|scaffold_187247 (970-765) | |
| 281-474, gnl|echTel1|scaffold_187247 (765-970) | |
| 281-474, gnl|hg17|chr7 (592727-592956) | |
| 281-474, gnl|Hg17|chr7 (592741-592934) | |
| 281-474, gnl|hg17|chr7_random (522456-522685) | |
| 281-474, gnl|loxAfr1|scaffold_18366 (40195-39962) | |
| 281-474, gnl|loxAfr1|scaffold_18366 (39962-40195) | |
| 281-474, gnl|mm7|chr5 (138156622-138156835) | |
| 281-474, gnl|mm7|chr5 (138156835-138156622) | |
| 281-474, gnl|Mm7|chr5 (138156631-138156827) | |
| 281-474, gnl|monDom2|scaffold_19 (49762347-49762137) | |
| 281-474, gnl|panTro1|chr6 (624586-624912) | |
| 281-474, gnl|panTro1|chr6 (624912-624586) | |
| 281-474, gnl|rheMac2|chr3 (38708870-38709098) | |
| 281-474, gnl|rheMac2|chr3 (38709098-38708872) | |
| 281-474, gnl|rn3|chr12 (15988434-15988209) | |
| 281-474, gnl|rn3|chr12 (15988209-15988434) | |
| 281-474, gnl|xenTro1|scaffold_254 (1485093-1484893) | |
| 281-474, gnl|xenTro1|scaffold_254 (1484893-1485093) | |
| 476-713, gnl|bosTau2|chr25 (40408898-40409134) | |
| 476-713, gnl|canFam2|chr6 (19086652-19086754) | |
| 476-713, gnl|Hg17|chr7 (598394-598599) | |
| 476-713, gnl|hg17|chr7_random (516885-517014) | |
| 476-713, gnl|loxAfr1|scaffold_18366 (37947-38095) | |
| 476-713, gnl|mm7|chr5 (138157818-138157709) | |
| 476-713, gnl|monDom2|scaffold_19 (49763946-49763778) | |
| 476-713, gnl|panTro1|chr6 (630474-630345) | |
| 476-713, gnl|rheMac2|chr3 (38714101-38713972) | |
| 476-713, gnl|rn3|chr12 (15986701-15986809) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| che (0.136314) | |
| pgl (0.118483) |