Non-Coding RNA Search

Ss1.1-Pig1-129G12.5

Sequence:


               
               TGGCGCCAGCACCGGAGTCCCGTGCCGCCGTTCGGGCCACCGCGAGCCGCGCCTCCCCGC
CATGGGCCCCCTTTCGGTGCGTCTGCTCATCCAGCGGGGGAGACCCAAGAGCGACCGGCT
GGGGAAGATCCGGAGCCTAGACCTGTCAGGGCTGAAACTGCTCTCAGAGCATCTGGACCC
CAAGCTCCTGAGCCGCCTGAAGCAGCTGCAAGAGCTGGACCTCTCCAACAACCAGCTGGA
GACACTGCCCGCCAACCTGGGCCTGTCCCACCTGCGCATCCTCCGCTGCGCCAACAACCA
GCTGGGCGACGTCACTGCCCTGTGCCAGTTCCCACAGCTCGAGGAGCTCAGCCTGGAGGG
CAATCCTTTCCTGACAGTCAGTGACAACCTGAAAGTCTCCTTCCTCCTGCCCAAGCTCCG
CAAGGTCAATGGCAAGGATGCTTCCTCCACTTGCTCTCAGGTGGAGAACCTGAACCGGGA
GCTGACCAGCAGGGTCACAGCTCACTGGGAGAAGTTTATGGCCGCGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGCGCCAGCACCGGAGTCCCGTGCCGCCGTTCGGGCCACCGCGAGCCGCGCCTCCCCGC
CATGGGCCCCCTTTCGGTGCGTCTGCTCATCCAGCGGGGGAGACCCAAGAGCGACCGGCT
GGGGAAGATCCGGAGCCTAGACCTGTCAGGGCTGAAACTGCTCTCAGAGCATCTGGACCC
CAAGCTCCTGAGCCGCCTGAAGCAGCTGCAAGAGCTGGACCTCTCCAACAACCAGCTGGA
GACACTGCCCGCCAACCTGGGCCTGTCCCACCTGCGCATCCTCCGCTGCGCCAACAACCA
GCTGGGCGACGTCACTGCCCTGTGCCAGTTCCCACAGCTCGAGGAGCTCAGCCTGGAGGG
CAATCCTTTCCTGACAGTCAGTGACAACCTGAAAGTCTCCTTCCTCCTGCCCAAGCTCCG
CAAGGTCAATGGCAAGGATGCTTCCTCCACTTGCTCTCAGGTGGAGAACCTGAACCGGGA
GCTGACCAGCAGGGTCACAGCTCACTGGGAGAAGTTTATGGCCGCGCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61842307|ref|XP_593489.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61842307|ref|XP_593489.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               142-383, gnl|bosTau2|chr25 (31104159-31104400)
               

               
               142-383, gnl|Hg17|chr7 (101699984-101700225)
               

               
               142-383, gnl|Mm7|chr5 (135106013-135105772)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               142-383, gnl|bosTau2|chr25 (31104159-31104400)
               

               
               142-383, gnl|Hg17|chr7 (101699984-101700225)
               

               
               142-383, gnl|Mm7|chr5 (135106013-135105772)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nca (0.136874)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nca (0.136874)

	142-383, gnl\|bosTau2\|chr25 (31104159-31104400)
	142-383, gnl\|Hg17\|chr7 (101699984-101700225)
	142-383, gnl\|Mm7\|chr5 (135106013-135105772)