Ss1.1-Pig1-129G14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGAGCTGCTCCCGCCCTTTCAGAGGCTCATCCAACCCGAGGAGATGTGGCTTTATCGGA ATCCGTACTTTGAAGCAGAGTATTTCCCTACCAAGCCGATGTTTGTTATTGCATTTCTCT CTCCGCTGTCTCTGATCCTCCTGGCCAAATGTCTCAAGAAGGCAGACACAGCAGACAGCC AACAAGCCTGCCTGGCTGCCAGCCTTGCTCTGGCTCTAAATGGTGTCTTTACCAACACAG TAAAACTGATAGTGGGGAGGCCCCGCCCAGACTTCTTCTACCGCTGCTTCCCCGATGGCC AAGCCCACCCTGACTCCGTGTGCACTGGCGATAAGGACGTGGTCAACGAGGGCCGGAAGA GCTTCCCCAGTGGACATTCTTCCTTTGCGTTTGCTGGTCTGGCCTTTGCATCCTTCTACC TGGCAGGGAAGCTGCACTGCTTCACGCCACGAGGCCGAGGAAAATCTTGGCGGTTCTGTG CCTTTCTGTCACCCCTGCTCTTGGCAGCTGTGATTGCCCTGTCCCGCACCTGTGACTACA AGCATCACTGGCAAGATGTCCTGGTTGGATCTGCCATGGGCCTGACCTTCGCCTACGTCT GCTACCGGCAGTACTACCCTCCCCTGACGGATGCTGAGTGCCACAAACCACTGCAGCGCA GCCCTGCTCTCCCCACCACAGAGAAGCAGCCCGGCGACCCTTACCATTNTGCTGTTTAGA AACTGGAGCTGCCTCCACGGAGAACAGGGCAGCATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGAGCTGCTCCCGCCCTTTCAGAGGCTCATCCAACCCGAGGAGATGTGGCTTTATCGGA ATCCGTACTTTGAAGCAGAGTATTTCCCTACCAAGCCGATGTTTGTTATTGCATTTCTCT CTCCGCTGTCTCTGATCCTCCTGGCCAAATGTCTCAAGAAGGCAGACACAGCAGACAGCC AACAAGCCTGCCTGGCTGCCAGCCTTGCTCTGGCTCTAAATGGTGTCTTTACCAACACAG TAAAACTGATAGTGGGGAGGCCCCGCCCAGACTTCTTCTACCGCTGCTTCCCCGATGGCC AAGCCCACCCTGACTCCGTGTGCACTGGCGATAAGGACGTGGTCAACGAGGGCCGGAAGA GCTTCCCCAGTGGACATTCTTCCTTTGCGTTTGCTGGTCTGGCCTTTGCATCCTTCTACC TGGCAGGGAAGCTGCACTGCTTCACGCCACGAGGCCGAGGAAAATCTTGGCGGTTCTGTG CCTTTCTGTCACCCCTGCTCTTGGCAGCTGTGATTGCCCTGTCCCGCACCTGTGACTACA AGCATCACTGGCAAGATGTCCTGGTTGGATCTGCCATGGGCCTGACCTTCGCCTACGTCT GCTACCGGCAGTACTACCCTCCCCTGACGGATGCTGAGTGCCACAAACCACTGCAGCGCA GCCCTGCTCTCCCCACCACAGAGAAGCAGCCCGGCGACCCTTACCATTNTGCTGTTTAGA AACTGGAGCTGCCTCCACGGAGAACAGGGCAGCATC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 3-106, gnl|bosTau2|chr27 (21649462-21649359) | |
| 3-106, gnl|Hg17|chr8 (38245658-38245555) | |
| 3-106, gnl|Mm7|chr8 (24476761-24476864) | |
| 258-384, gnl|bosTau2|chr27 (21648011-21647885) | |
| 258-384, gnl|canFam2|chr16 (30181588-30181432) | |
| 258-384, gnl|danRer3|chr10 (11813902-11814075) | |
| 258-384, gnl|dasNov1|scaffold_7981 (51944-51783) | |
| 258-384, gnl|echTel1|scaffold_183528 (306-431) | |
| 258-384, gnl|fr1|chrUn (1356938-1356778) | |
| 258-384, gnl|galGal2|chrUn (472036-472173) | |
| 258-384, gnl|hg17|chr8 (38243922-38244085) | |
| 258-384, gnl|Hg17|chr8 (38244068-38243942) | |
| 258-384, gnl|loxAfr1|scaffold_1327 (23228-23092) | |
| 258-384, gnl|mm7|chr8 (24478295-24478143) | |
| 258-384, gnl|Mm7|chr8 (24478147-24478273) | |
| 258-384, gnl|monDom2|scaffold_1 (84635112-84634958) | |
| 258-384, gnl|oryCun1|scaffold_212842 (37380-37516) | |
| 258-384, gnl|panTro1|chr7 (39626112-39626275) | |
| 258-384, gnl|rheMac2|chr8 (38722229-38722392) | |
| 258-384, gnl|rn3|chr16 (70727325-70727485) | |
| 258-384, gnl|tetNig1|chr12 (5927977-5927829) | |
| 258-384, gnl|xenTro1|scaffold_190 (1671175-1671323) | |
| 385-558, gnl|bosTau2|chr26 (27615135-27614962) | |
| 385-558, gnl|Hg17|chr10 (122324633-122324806) | |
| 385-558, gnl|Mm7|chr7 (125500928-125501101) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-106, gnl|bosTau2|chr27 (21649462-21649359) | |
| 3-106, gnl|Hg17|chr8 (38245658-38245555) | |
| 3-106, gnl|Mm7|chr8 (24476761-24476864) | |
| 258-384, gnl|bosTau2|chr27 (21648011-21647885) | |
| 258-384, gnl|canFam2|chr16 (30181588-30181432) | |
| 258-384, gnl|danRer3|chr10 (11813902-11814075) | |
| 258-384, gnl|dasNov1|scaffold_7981 (51944-51783) | |
| 258-384, gnl|echTel1|scaffold_183528 (306-431) | |
| 258-384, gnl|fr1|chrUn (1356938-1356778) | |
| 258-384, gnl|galGal2|chrUn (472036-472173) | |
| 258-384, gnl|hg17|chr8 (38243922-38244085) | |
| 258-384, gnl|Hg17|chr8 (38244068-38243942) | |
| 258-384, gnl|loxAfr1|scaffold_1327 (23228-23092) | |
| 258-384, gnl|mm7|chr8 (24478295-24478143) | |
| 258-384, gnl|Mm7|chr8 (24478147-24478273) | |
| 258-384, gnl|monDom2|scaffold_1 (84635112-84634958) | |
| 258-384, gnl|oryCun1|scaffold_212842 (37380-37516) | |
| 258-384, gnl|panTro1|chr7 (39626112-39626275) | |
| 258-384, gnl|rheMac2|chr8 (38722229-38722392) | |
| 258-384, gnl|rn3|chr16 (70727325-70727485) | |
| 258-384, gnl|tetNig1|chr12 (5927977-5927829) | |
| 258-384, gnl|xenTro1|scaffold_190 (1671175-1671323) | |
| 385-558, gnl|bosTau2|chr26 (27615135-27614962) | |
| 385-558, gnl|Hg17|chr10 (122324633-122324806) | |
| 385-558, gnl|Mm7|chr7 (125500928-125501101) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cov (0.264306) | |
| csp (0.161186) |