Non-Coding RNA Search

Ss1.1-Pig1-129K17.5

Sequence:


               
               AAACAGTACCAGAGAAAGATTAAAGAGTCAGAAGAATTTTTTGTTTGCTTAAGATGTCTA
TAGCTGAACAAGCTCAAATTGTAGTCTCGTCATTGAACAGAGGAAAGAAGCAGAGAGAGC
CAGGGGGGGAAAGAAGAGAAGGAGGGTGGGGGGGGAGGGGAGCAGAGAGAGGAGAGAAGA
GGAGAGGAAAGAAGGAAGGGTGTGTATTTCATGTCCCTGCTTTGGAGATCAACACATTTG
AACACGGCACTCGGGAGATTTACTTGCACAAGCCTCACCATCTTTCCACCCAAATCCAAT
CACCTGCTGAATCTGCGAGCATGTTACCCTGAGATAGGGTTTCAATTAACCCTTCCTTGA
TATCCATAACGCTGAAGTTTTGTGGGACTTGAATTTCTATTTCTACAAATTTCCCTTGGG
CAATATTTTCTTGGTTAGTTCTTTAGATCCTTTTCATATTTTCAGCCCCAAAGCCTTCAT
TTGGGGCCAAGATGATGGCTAGTGTTTTATCTGTGTAGTTCACCATCATATCTCCCTAGA
CAATGAAAATTCTTGCGTTGCTGCCATTGATTCTGTCTCTCAACCAAAAGAAATCTGCAT
TGTTTCACTTAATTTTTAAATTTCTGGATGCTTCGGTTTCTTCCCTGGTAGTGGGGGTAG
TAAAAGTCCCTAAAATAAACTAGCAGATATATGGGTCTTACGGTCATGTCTACTATATCA
TGAACACTTAACAACTGTTAGCGCTCATCGGTATTATTCTCACAATGTTCCTTGAGATAC
GAGGAATAAAACTGTCAAATTTCTTTAACTAATGTAGATGCAAATGCACTTGGATTAATA
TGAGGTAAGTTGCAAAATCTAGGATAAACCCAGGTTAACTATCAAAGGCTTGGTAAATGC
AAGTTTATGGGTTATATATTTTTCTTTATGTAGTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAACAGTACCAGAGAAAGATTAAAGAGTCAGAAGAATTTTTTGTTTGCTTAAGATGTCTA
TAGCTGAACAAGCTCAAATTGTAGTCTCGTCATTGAACAGAGGAAAGAAGCAGAGAGAGC
CAGGGGGGGAAAGAAGAGAAGGAGGGTGGGGGGGGAGGGGAGCAGAGAGAGGAGAGAAGA
GGAGAGGAAAGAAGGAAGGGTGTGTATTTCATGTCCCTGCTTTGGAGATCAACACATTTG
AACACGGCACTCGGGAGATTTACTTGCACAAGCCTCACCATCTTTCCACCCAAATCCAAT
CACCTGCTGAATCTGCGAGCATGTTACCCTGAGATAGGGTTTCAATTAACCCTTCCTTGA
TATCCATAACGCTGAAGTTTTGTGGGACTTGAATTTCTATTTCTACAAATTTCCCTTGGG
CAATATTTTCTTGGTTAGTTCTTTAGATCCTTTTCATATTTTCAGCCCCAAAGCCTTCAT
TTGGGGCCAAGATGATGGCTAGTGTTTTATCTGTGTAGTTCACCATCATATCTCCCTAGA
CAATGAAAATTCTTGCGTTGCTGCCATTGATTCTGTCTCTCAACCAAAAGAAATCTGCAT
TGTTTCACTTAATTTTTAAATTTCTGGATGCTTCGGTTTCTTCCCTGGTAGTGGGGGTAG
TAAAAGTCCCTAAAATAAACTAGCAGATATATGGGTCTTACGGTCATGTCTACTATATCA
TGAACACTTAACAACTGTTAGCGCTCATCGGTATTATTCTCACAATGTTCCTTGAGATAC
GAGGAATAAAACTGTCAAATTTCTTTAACTAATGTAGATGCAAATGCACTTGGATTAATA
TGAGGTAAGTTGCAAAATCTAGGATAAACCCAGGTTAACTATCAAAGGCTTGGTAAATGC
AAGTTTATGGGTTATATATTTTTCTTTATGTAGTAG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-454, gnl|bosTau2|chr2 (70610639-70610199)
               

               
               1-454, gnl|Hg17|chr2 (231187498-231188057)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-454, gnl|bosTau2|chr2 (70610639-70610199)
               

               
               1-454, gnl|Hg17|chr2 (231187498-231188057)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sag (0.182715)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)

	1-454, gnl\|bosTau2\|chr2 (70610639-70610199)
	1-454, gnl\|Hg17\|chr2 (231187498-231188057)