Ss1.1-Pig1-129N03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAACACCTCAGCGTCCGCACGCTCTACTTCATCGCCTACCTGGCCTTCGGCCTGGGGAC CGGGCTGGCCACCCTGTCCAGGAACCTCTACGTGGTTCTGTCCCTCTGCGTCACCTATGG GATTTTGTTCTCCACCCTCTGCACGGTGCCCTACTCGCTGCTGTGCGACTACTACCAGAG CAGGCAGTTCGCAGGGTCCAGCGCGGATGGCACAAGGCGGGGCATGGGAGTGGACATCTC TCTGCTCAGCTGCCAGTACTTCCTGGCCCAGATCCTGGTGGCCCTGGTCCTGGGGCCCCT GACGTCGGCTGTGGGCAGCGCCAACGGGGTGATGTACTTCTCCAGCCTCGTGTCCTTCCT GGGCTGCTTGTACTCCTCCCTGTTTGTCGTCTACGAAATCCCGCCCAGCGACACGGCCGC TGAGGAGCACCAGCCCCTCCTGCTGAACGTCTGAGTTGCAAAGCCGCGGCAGGGGTCAGA GGCAGGCCAGCCAGCCGGATGCCCAAGGGCCCTGGGGCAGGCGGGACAGGCCTCCTGTTG GGATGTAAATATGTGACAAAACAATAAACAGCGGCAGCAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAACACCTCAGCGTCCGCACGCTCTACTTCATCGCCTACCTGGCCTTCGGCCTGGGGAC CGGGCTGGCCACCCTGTCCAGGAACCTCTACGTGGTTCTGTCCCTCTGCGTCACCTATGG GATTTTGTTCTCCACCCTCTGCACGGTGCCCTACTCGCTGCTGTGCGACTACTACCAGAG CAGGCAGTTCGCAGGGTCCAGCGCGGATGGCACAAGGCGGGGCATGGGAGTGGACATCTC TCTGCTCAGCTGCCAGTACTTCCTGGCCCAGATCCTGGTGGCCCTGGTCCTGGGGCCCCT GACGTCGGCTGTGGGCAGCGCCAACGGGGTGATGTACTTCTCCAGCCTCGTGTCCTTCCT GGGCTGCTTGTACTCCTCCCTGTTTGTCGTCTACGAAATCCCGCCCAGCGACACGGCCGC TGAGGAGCACCAGCCCCTCCTGCTGAACGTCTGAGTTGCAAAGCCGCGGCAGGGGTCAGA GGCAGGCCAGCCAGCCGGATGCCCAAGGGCCCTGGGGCAGGCGGGACAGGCCTCCTGTTG GGATGTAAATATGTGACAAAACAATAAACAGCGGCAGCAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
| 185-579, gnl|bosTau2|chr2 (28243023-28242631) | |
| 185-579, gnl|canFam2|chr5 (64859618-64859906) | |
| 185-579, gnl|danRer3|chr11 (41767035-41766759) | |
| 185-579, gnl|dasNov1|scaffold_23702 (4458-4216) | |
| 185-579, gnl|echTel1|scaffold_231639 (1353-1069) | |
| 185-579, gnl|fr1|chrUn (29811900-29812173) | |
| 185-579, gnl|galGal2|chr21 (163489-163199) | |
| 185-579, gnl|hg17|chr1 (8338053-8338341) | |
| 185-579, gnl|Hg17|chr1 (8338070-8338486) | |
| 185-579, gnl|loxAfr1|scaffold_9570 (74134-73849) | |
| 185-579, gnl|mm7|chr4 (149619359-149619073) | |
| 185-579, gnl|Mm7|chr4 (149619342-149618944) | |
| 185-579, gnl|monDom2|scaffold_148 (1480476-1480179) | |
| 185-579, gnl|oryCun1|scaffold_183177 (71193-70908) | |
| 185-579, gnl|panTro1|chr1_random (77452687-77452399) | |
| 185-579, gnl|rheMac2|chr1 (11370230-11370518) | |
| 185-579, gnl|rn3|chr5 (167795436-167795150) | |
| 185-579, gnl|tetNig1|chr11 (4113188-4112901) | |
| 185-579, gnl|xenTro1|scaffold_503 (161343-161066) |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 185-579, gnl|bosTau2|chr2 (28243023-28242631) | |
| 185-579, gnl|canFam2|chr5 (64859618-64859906) | |
| 185-579, gnl|danRer3|chr11 (41767035-41766759) | |
| 185-579, gnl|dasNov1|scaffold_23702 (4458-4216) | |
| 185-579, gnl|echTel1|scaffold_231639 (1353-1069) | |
| 185-579, gnl|fr1|chrUn (29811900-29812173) | |
| 185-579, gnl|galGal2|chr21 (163489-163199) | |
| 185-579, gnl|hg17|chr1 (8338053-8338341) | |
| 185-579, gnl|Hg17|chr1 (8338070-8338486) | |
| 185-579, gnl|loxAfr1|scaffold_9570 (74134-73849) | |
| 185-579, gnl|mm7|chr4 (149619359-149619073) | |
| 185-579, gnl|Mm7|chr4 (149619342-149618944) | |
| 185-579, gnl|monDom2|scaffold_148 (1480476-1480179) | |
| 185-579, gnl|oryCun1|scaffold_183177 (71193-70908) | |
| 185-579, gnl|panTro1|chr1_random (77452687-77452399) | |
| 185-579, gnl|rheMac2|chr1 (11370230-11370518) | |
| 185-579, gnl|rn3|chr5 (167795436-167795150) | |
| 185-579, gnl|tetNig1|chr11 (4113188-4112901) | |
| 185-579, gnl|xenTro1|scaffold_503 (161343-161066) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbe (0.239234) |