Ss1.1-Pig1-130M10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAACGAGTTCTGGACCCGGGGCTCGGGACTTGGTGTCCCCCCTCACTCGGAGCTCACCA ACCCAGCCAGCAACCTGGCAACGGTGGCAGTGTTGCCTGTGTGTGCTGAGGTGCCCATGG TGGCCTTCATGCTGGAGCTGCAGCATGCTCTACAAGCCATCGGCCCTACACTCCTCCTCA ACAGTGACATCATCCGGGCGCGCCTGGGGGCTTCTGCACTGGACAGCATCCAAGAATTCC GGCTGTCAGGATGGCTGGCCCAGCAGGAGGACACGCACCGCATCGTGCTCTACCAGACAG ACACATCGCTGACGCCCTGGACTGTGCGTTGCTTGCGCCAGGCCGACTGCATCCTCATCG TGGGCCTGGGCGACCAGGAACCCACACTCGGCCAGCTGGAGCAGATGCTGGAGAATACGG CCGTGCGCGCCCTCAAGCAGCTGGTCCTGCTGCACCGTGAGGAAGGCCCGGGCCCCACCC GCACAGTGGAGTGGCTCAACATGCGCAGCTGGTGCTCAGGGCACCTGCATCTGCGCTGTC CGCGCCGCCTTTTCTCGCGCCGCAGCCCTGCCAAGCTGCATGAGCTCTACGAGAAGGTTT TCTCGAGGCGCGCGGACCGGCACAGCGACTTCTCTCGCCTGGCGCGAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAACGAGTTCTGGACCCGGGGCTCGGGACTTGGTGTCCCCCCTCACTCGGAGCTCACCA ACCCAGCCAGCAACCTGGCAACGGTGGCAGTGTTGCCTGTGTGTGCTGAGGTGCCCATGG TGGCCTTCATGCTGGAGCTGCAGCATGCTCTACAAGCCATCGGCCCTACACTCCTCCTCA ACAGTGACATCATCCGGGCGCGCCTGGGGGCTTCTGCACTGGACAGCATCCAAGAATTCC GGCTGTCAGGATGGCTGGCCCAGCAGGAGGACACGCACCGCATCGTGCTCTACCAGACAG ACACATCGCTGACGCCCTGGACTGTGCGTTGCTTGCGCCAGGCCGACTGCATCCTCATCG TGGGCCTGGGCGACCAGGAACCCACACTCGGCCAGCTGGAGCAGATGCTGGAGAATACGG CCGTGCGCGCCCTCAAGCAGCTGGTCCTGCTGCACCGTGAGGAAGGCCCGGGCCCCACCC GCACAGTGGAGTGGCTCAACATGCGCAGCTGGTGCTCAGGGCACCTGCATCTGCGCTGTC CGCGCCGCCTTTTCTCGCGCCGCAGCCCTGCCAAGCTGCATGAGCTCTACGAGAAGGTTT TCTCGAGGCGCGCGGACCGGCACAGCGACTTCTCTCGCCTGGCGCGAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 21-163, gnl|bosTau2|chr7 (12322228-12322370) | |
| 21-163, gnl|Hg17|chr19 (7524760-7524902) | |
| 21-163, gnl|Mm7|chr8 (3448769-3448911) | |
| 382-578, gnl|bosTau2|chr11 (85237236-85237432) | |
| 382-578, gnl|canFam2|chr9 (51599735-51599535) | |
| 382-578, gnl|danRer3|chr5 (13914397-13914189) | |
| 382-578, gnl|dasNov1|scaffold_73632 (2872-2674) | |
| 382-578, gnl|echTel1|scaffold_301478 (5374-5152) | |
| 382-578, gnl|fr1|chrUn (259923273-259923468) | |
| 382-578, gnl|galGal2|chr17 (9223550-9223744) | |
| 382-578, gnl|hg17|chr9 (137649341-137649555) | |
| 382-578, gnl|Hg17|chr9 (137649540-137649345) | |
| 382-578, gnl|mm7|chr2 (25048445-25048230) | |
| 382-578, gnl|Mm7|chr2 (25048244-25048439) | |
| 382-578, gnl|monDom2|scaffold_1 (186596794-186596993) | |
| 382-578, gnl|oryCun1|scaffold_211543 (7577-7790) | |
| 382-578, gnl|panTro1|chr11_random (47983424-47983638) | |
| 382-578, gnl|rheMac2|chr15 (756404-756190) | |
| 382-578, gnl|rn3|chr3 (5189050-5188836) | |
| 382-578, gnl|tetNig1|chrUn_random (85151274-85151083) | |
| 382-578, gnl|xenTro1|scaffold_302 (1143510-1143719) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 21-163, gnl|bosTau2|chr7 (12322228-12322370) | |
| 21-163, gnl|Hg17|chr19 (7524760-7524902) | |
| 21-163, gnl|Mm7|chr8 (3448769-3448911) | |
| 382-578, gnl|bosTau2|chr11 (85237236-85237432) | |
| 382-578, gnl|canFam2|chr9 (51599735-51599535) | |
| 382-578, gnl|danRer3|chr5 (13914397-13914189) | |
| 382-578, gnl|dasNov1|scaffold_73632 (2872-2674) | |
| 382-578, gnl|echTel1|scaffold_301478 (5374-5152) | |
| 382-578, gnl|fr1|chrUn (259923273-259923468) | |
| 382-578, gnl|galGal2|chr17 (9223550-9223744) | |
| 382-578, gnl|hg17|chr9 (137649341-137649555) | |
| 382-578, gnl|Hg17|chr9 (137649540-137649345) | |
| 382-578, gnl|mm7|chr2 (25048445-25048230) | |
| 382-578, gnl|Mm7|chr2 (25048244-25048439) | |
| 382-578, gnl|monDom2|scaffold_1 (186596794-186596993) | |
| 382-578, gnl|oryCun1|scaffold_211543 (7577-7790) | |
| 382-578, gnl|panTro1|chr11_random (47983424-47983638) | |
| 382-578, gnl|rheMac2|chr15 (756404-756190) | |
| 382-578, gnl|rn3|chr3 (5189050-5188836) | |
| 382-578, gnl|tetNig1|chrUn_random (85151274-85151083) | |
| 382-578, gnl|xenTro1|scaffold_302 (1143510-1143719) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) |