Ss1.1-Pig1-131A06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGGCCTTGAAGTAGCTGCTGTTGCACCCTGGACGTCCAGCTGACCGCGGACCTGCTTC TGAGAAATGTCTGCCAGCGAGACAGAAGCCAGTGCCAGCAGCACCCAGGTGACCACGGAA GAACCGGTACAGCAGCCCAGCGTGGTGGACCGCGTGGCCGGAATGCCACTCATCAGCTCC ACATGCCACATGGTGTCTGCTGCCTACACGTCCACCAAGGAGAGCCACCCCCACGTCAAG ACCGTCTGCGACGTGGCCGAGAAGGGCGTGAAGACCCTCACGGCGGCTGCTGTCAGCGGG GCCCAGCCCATCCTGTCCAAGTTGGAACCCCAGCTCACATCAGCCAGTGAATACGCCCAC AGGGGACTGGACAAGCTGGAGGAAAATCTGCCCATCCTGCAGCAGCCATCGGAGAAGGTC CTAGCAGACACCAAGGAGCTTGTGTCGTCCAAGGTGTCGGAAGCCCGAGAAGCTGTGTCA AACACAGTGTCCAGCGCCAAGGACACAGTAGCCTCCCGGGTGACTGAGGCAGTGGATGTG ACCCGGGGTGCTGTGCAGAGCGGCGTGGACCTGACCAAGTCCATGGTGACCAGCAGCGTC CACTCGGTCATGGGCTCCCGCGTGGGCCAGATGGTGCTAAGCGGGGTGGACACAGTGCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGGCCTTGAAGTAGCTGCTGTTGCACCCTGGACGTCCAGCTGACCGCGGACCTGCTTC TGAGAAATGTCTGCCAGCGAGACAGAAGCCAGTGCCAGCAGCACCCAGGTGACCACGGAA GAACCGGTACAGCAGCCCAGCGTGGTGGACCGCGTGGCCGGAATGCCACTCATCAGCTCC ACATGCCACATGGTGTCTGCTGCCTACACGTCCACCAAGGAGAGCCACCCCCACGTCAAG ACCGTCTGCGACGTGGCCGAGAAGGGCGTGAAGACCCTCACGGCGGCTGCTGTCAGCGGG GCCCAGCCCATCCTGTCCAAGTTGGAACCCCAGCTCACATCAGCCAGTGAATACGCCCAC AGGGGACTGGACAAGCTGGAGGAAAATCTGCCCATCCTGCAGCAGCCATCGGAGAAGGTC CTAGCAGACACCAAGGAGCTTGTGTCGTCCAAGGTGTCGGAAGCCCGAGAAGCTGTGTCA AACACAGTGTCCAGCGCCAAGGACACAGTAGCCTCCCGGGTGACTGAGGCAGTGGATGTG ACCCGGGGTGCTGTGCAGAGCGGCGTGGACCTGACCAAGTCCATGGTGACCAGCAGCGTC CACTCGGTCATGGGCTCCCGCGTGGGCCAGATGGTGCTAAGCGGGGTGGACACAGTGCTG |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 133-334, gnl|bosTau2|chr7 (14791818-14792019) | |
| 133-334, gnl|canFam2|chr20 (57869187-57869057) | |
| 133-334, gnl|danRer3|chr8 (13244019-13243888) | |
| 133-334, gnl|dasNov1|scaffold_153819 (3667-3798) | |
| 133-334, gnl|echTel1|scaffold_211271 (1115-984) | |
| 133-334, gnl|fr1|chrUn (226918584-226918715) | |
| 133-334, gnl|galGal2|chr28 (4135173-4135042) | |
| 133-334, gnl|hg17|chr19 (4810837-4810968) | |
| 133-334, gnl|Hg17|chr19 (4811039-4810838) | |
| 133-334, gnl|mm7|chr17 (54444696-54444827) | |
| 133-334, gnl|Mm7|chr17 (54444898-54444697) | |
| 133-334, gnl|monDom2|scaffold_85 (2007633-2007764) | |
| 133-334, gnl|oryCun1|scaffold_172130 (2710-2841) | |
| 133-334, gnl|panTro1|chr20 (5099022-5099153) | |
| 133-334, gnl|rheMac2|chr19 (4752125-4752256) | |
| 133-334, gnl|rn3|chrUn (25488793-25488662) | |
| 133-334, gnl|tetNig1|chrUn_random (43779187-43779056) | |
| 133-334, gnl|xenTro1|scaffold_28 (384244-384375) | |
| 416-660, gnl|bosTau2|chr7 (14793470-14793714) | |
| 416-660, gnl|Hg17|chr19 (4803315-4803083) | |
| 416-660, gnl|Mm7|chr17 (54442681-54442437) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 133-334, gnl|bosTau2|chr7 (14791818-14792019) | |
| 133-334, gnl|canFam2|chr20 (57869187-57869057) | |
| 133-334, gnl|danRer3|chr8 (13244019-13243888) | |
| 133-334, gnl|dasNov1|scaffold_153819 (3667-3798) | |
| 133-334, gnl|echTel1|scaffold_211271 (1115-984) | |
| 133-334, gnl|fr1|chrUn (226918584-226918715) | |
| 133-334, gnl|galGal2|chr28 (4135173-4135042) | |
| 133-334, gnl|hg17|chr19 (4810837-4810968) | |
| 133-334, gnl|Hg17|chr19 (4811039-4810838) | |
| 133-334, gnl|mm7|chr17 (54444696-54444827) | |
| 133-334, gnl|Mm7|chr17 (54444898-54444697) | |
| 133-334, gnl|monDom2|scaffold_85 (2007633-2007764) | |
| 133-334, gnl|oryCun1|scaffold_172130 (2710-2841) | |
| 133-334, gnl|panTro1|chr20 (5099022-5099153) | |
| 133-334, gnl|rheMac2|chr19 (4752125-4752256) | |
| 133-334, gnl|rn3|chrUn (25488793-25488662) | |
| 133-334, gnl|tetNig1|chrUn_random (43779187-43779056) | |
| 133-334, gnl|xenTro1|scaffold_28 (384244-384375) | |
| 416-660, gnl|bosTau2|chr7 (14793470-14793714) | |
| 416-660, gnl|Hg17|chr19 (4803315-4803083) | |
| 416-660, gnl|Mm7|chr17 (54442681-54442437) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) |