Ss1.1-Pig1-131L16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TATCAGAAACTGAGCAGCAAAATTTCCGTGGTGCCTCCAACCCCGCCTCCTCTCAGTGAA AGCCAGTGCAGCGGCAGCCCCAGCAGGTTGCAGGAACTCGGTCAGTTTAAAGGATTTAAT AAGTCCGTGGAAAATCTGTTTCTGTCTGTTACCACCCACATGAAAAAAACTTTCCAAGTC CCAGAATGACATGAGCTCTGACAAGCAGCAGCCAGCCACGGGTCCCAGGCAGAGCGCAGG CCAGACGGAGCGGAGGAGCCAGTCGGACACAGCGATCAACGTCGCCACCAGGAAGGTCAG CACACCAGATCTTCTGAAACCTCTCGCTCAGGAGAGTCCCAAACGCACCACCAGCCCTGT TTTGAAGCAAGAGGATCGCTTGTCCAGTCCGGCGCCCACCCCCTTATTCTCCGGAGGCTG GAGACACGGCAGTTTAATTAGCATCAACAGCACTTGTACAGAGATGGGCAATTTCGACAA CACGCATGTCACTGGAGAGATAGAATTTGCCATTCGCTATTGCTTCAGAGCTCACTCTTT AGAAATCTGCATCCAGGCCTGTAAGAATCTTGCCTACGGGGAAGAAAAGAAGAAAAAGTG CAACCCGTACGTAAAGACCTACCTGCTGCCTGACAGGTCGTCCCAGGGGAAACGCAAGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TATCAGAAACTGAGCAGCAAAATTTCCGTGGTGCCTCCAACCCCGCCTCCTCTCAGTGAA AGCCAGTGCAGCGGCAGCCCCAGCAGGTTGCAGGAACTCGGTCAGTTTAAAGGATTTAAT AAGTCCGTGGAAAATCTGTTTCTGTCTGTTACCACCCACATGAAAAAAACTTTCCAAGTC CCAGAATGACATGAGCTCTGACAAGCAGCAGCCAGCCACGGGTCCCAGGCAGAGCGCAGG CCAGACGGAGCGGAGGAGCCAGTCGGACACAGCGATCAACGTCGCCACCAGGAAGGTCAG CACACCAGATCTTCTGAAACCTCTCGCTCAGGAGAGTCCCAAACGCACCACCAGCCCTGT TTTGAAGCAAGAGGATCGCTTGTCCAGTCCGGCGCCCACCCCCTTATTCTCCGGAGGCTG GAGACACGGCAGTTTAATTAGCATCAACAGCACTTGTACAGAGATGGGCAATTTCGACAA CACGCATGTCACTGGAGAGATAGAATTTGCCATTCGCTATTGCTTCAGAGCTCACTCTTT AGAAATCTGCATCCAGGCCTGTAAGAATCTTGCCTACGGGGAAGAAAAGAAGAAAAAGTG CAACCCGTACGTAAAGACCTACCTGCTGCCTGACAGGTCGTCCCAGGGGAAACGCAAGAC |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 168-292, gnl|bosTau2|chr9 (55903537-55903661) | |
| 168-292, gnl|canFam2|chr1 (51172075-51172224) | |
| 168-292, gnl|dasNov1|scaffold_133563 (3348-3497) | |
| 168-292, gnl|galGal2|chr3 (51050317-51050466) | |
| 168-292, gnl|hg17|chr6 (159109510-159109659) | |
| 168-292, gnl|Hg17|chr6 (159109528-159109652) | |
| 168-292, gnl|loxAfr1|scaffold_92607 (256-107) | |
| 168-292, gnl|mm7|chrUn_random (8404098-8403955) | |
| 168-292, gnl|Mm7|chrUn_random (8404084-8403960) | |
| 168-292, gnl|monDom2|scaffold_0 (44908083-44907933) | |
| 168-292, gnl|panTro1|chr5 (162947049-162947198) | |
| 168-292, gnl|rheMac2|chr4 (104219712-104219563) | |
| 168-292, gnl|rn3|chr1 (41156301-41156444) | |
| 425-612, gnl|bosTau2|chr9 (55920667-55920854) | |
| 425-612, gnl|canFam2|chr1 (51187887-51188086) | |
| 425-612, gnl|dasNov1|scaffold_99485 (872-672) | |
| 425-612, gnl|galGal2|chr3 (51055543-51055738) | |
| 425-612, gnl|hg17|chr6 (159136909-159137108) | |
| 425-612, gnl|Hg17|chr6 (159136918-159137105) | |
| 425-612, gnl|loxAfr1|scaffold_32230 (3128-2959) | |
| 425-612, gnl|monDom2|scaffold_0 (44884737-44884539) | |
| 425-612, gnl|oryCun1|scaffold_186676 (4098-4294) | |
| 425-612, gnl|panTro1|chr5 (162974394-162974593) | |
| 425-612, gnl|rheMac2|chr4 (104187630-104187433) | |
| 425-612, gnl|rn3|chr1 (41165322-41165518) | |
| 425-612, gnl|xenTro1|scaffold_259 (30145-29946) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 168-292, gnl|bosTau2|chr9 (55903537-55903661) | |
| 168-292, gnl|canFam2|chr1 (51172075-51172224) | |
| 168-292, gnl|dasNov1|scaffold_133563 (3348-3497) | |
| 168-292, gnl|galGal2|chr3 (51050317-51050466) | |
| 168-292, gnl|hg17|chr6 (159109510-159109659) | |
| 168-292, gnl|Hg17|chr6 (159109528-159109652) | |
| 168-292, gnl|loxAfr1|scaffold_92607 (256-107) | |
| 168-292, gnl|mm7|chrUn_random (8404098-8403955) | |
| 168-292, gnl|Mm7|chrUn_random (8404084-8403960) | |
| 168-292, gnl|monDom2|scaffold_0 (44908083-44907933) | |
| 168-292, gnl|panTro1|chr5 (162947049-162947198) | |
| 168-292, gnl|rheMac2|chr4 (104219712-104219563) | |
| 168-292, gnl|rn3|chr1 (41156301-41156444) | |
| 425-612, gnl|bosTau2|chr9 (55920667-55920854) | |
| 425-612, gnl|canFam2|chr1 (51187887-51188086) | |
| 425-612, gnl|dasNov1|scaffold_99485 (872-672) | |
| 425-612, gnl|galGal2|chr3 (51055543-51055738) | |
| 425-612, gnl|hg17|chr6 (159136909-159137108) | |
| 425-612, gnl|Hg17|chr6 (159136918-159137105) | |
| 425-612, gnl|loxAfr1|scaffold_32230 (3128-2959) | |
| 425-612, gnl|monDom2|scaffold_0 (44884737-44884539) | |
| 425-612, gnl|oryCun1|scaffold_186676 (4098-4294) | |
| 425-612, gnl|panTro1|chr5 (162974394-162974593) | |
| 425-612, gnl|rheMac2|chr4 (104187630-104187433) | |
| 425-612, gnl|rn3|chr1 (41165322-41165518) | |
| 425-612, gnl|xenTro1|scaffold_259 (30145-29946) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cli (0.152812) |