Non-Coding RNA Search

Ss1.1-Pig1-132C02.5

Sequence:


               
               CATGAACTACATGGTGTACTTCAACTTCCTGGGGTGCGTGCTGCCCCCGCTCGTCATCAT
GCTCGCCATCTACGCCAAGATCTTCACGGTGGCCTGCCGGCAGCTGCAGCGCACGGAGCT
CATGGACCACTCGCGGACCGTCCTCCAGCGGGAGATCCACGCGGCCAAGCCCCTGGCCAT
GATCGTGGGCTTCTTCGCCCTGTGCTGGCTGCCTCTTCACGCCATCAACTGTGCCACGCT
TTTCCACCCGGGCTGGGCGAAGGAGAAGCCCAAGTGGGCCATGAACGTGGCCATCCTCCT
GTCACACGCCAACTCGGTCGTCAACCCCATCGTGTACGCCTATCGGAACCGAGACTTCCG
CGCCACGTTTCACAGAATCATCTCCAGGTACGTCCTCTGCCAGACAGACGGGCTCAAGAG
CGGCGGCGGGCAGGCGGGGGCGCAGCCGGCTCTCCCCCTATGACCCCGGCTCCGGCCTCG
TCCCCAAGGCACGCATTCACAATGACGAAGGGACGGGACACTGACGGGACGGGCCGCGGC
GCTCTGAGAAGGACCCCCTCGGCCCCAGCCGCCAGCGGCTGCCTCTGTGGAGCCCTCCCT
GGAGCCGCCACCTACCCAGTGAAAATGTCCCCGTTACTGGTGGGTCCCGGGGTTGGCGAG
GGCACGTGTGGTTCTCTCGGGCCGCTCTTCCCGAGGGGATGATGCTGCGGCTGGAATGGA
CTGTCAGAGACTGATTTGGGGGGTCTTTTTTGGTACGAGTTCCACCTCTTTCAATGGTGG
GAGATGCTCGAAACTATTTTACTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATGAACTACATGGTGTACTTCAACTTCCTGGGGTGCGTGCTGCCCCCGCTCGTCATCAT
GCTCGCCATCTACGCCAAGATCTTCACGGTGGCCTGCCGGCAGCTGCAGCGCACGGAGCT
CATGGACCACTCGCGGACCGTCCTCCAGCGGGAGATCCACGCGGCCAAGCCCCTGGCCAT
GATCGTGGGCTTCTTCGCCCTGTGCTGGCTGCCTCTTCACGCCATCAACTGTGCCACGCT
TTTCCACCCGGGCTGGGCGAAGGAGAAGCCCAAGTGGGCCATGAACGTGGCCATCCTCCT
GTCACACGCCAACTCGGTCGTCAACCCCATCGTGTACGCCTATCGGAACCGAGACTTCCG
CGCCACGTTTCACAGAATCATCTCCAGGTACGTCCTCTGCCAGACAGACGGGCTCAAGAG
CGGCGGCGGGCAGGCGGGGGCGCAGCCGGCTCTCCCCCTATGACCCCGGCTCCGGCCTCG
TCCCCAAGGCACGCATTCACAATGACGAAGGGACGGGACACTGACGGGACGGGCCGCGGC
GCTCTGAGAAGGACCCCCTCGGCCCCAGCCGCCAGCGGCTGCCTCTGTGGAGCCCTCCCT
GGAGCCGCCACCTACCCAGTGAAAATGTCCCCGTTACTGGTGGGTCCCGGGGTTGGCGAG
GGCACGTGTGGTTCTCTCGGGCCGCTCTTCCCGAGGGGATGATGCTGCGGCTGGAATGGA
CTGTCAGAGACTGATTTGGGGGGTCTTTTTTGGTACGAGTTCCACCTCTTTCAATGGTGG
GAGATGCTCGAAACTATTTTACTG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61844227|ref|XP_608217.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61844227|ref|XP_608217.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-369, gnl|bosTau2|chr16 (2330820-2331188)
               

               
               1-369, gnl|Hg17|chr1 (199866232-199866600)
               

               
               1-369, gnl|Mm7|chr1 (134093189-134092821)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-369, gnl|bosTau2|chr16 (2330820-2331188)
               

               
               1-369, gnl|Hg17|chr1 (199866232-199866600)
               

               
               1-369, gnl|Mm7|chr1 (134093189-134092821)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cly (0.241284)
               

               
               col (0.195008)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.241284)
               

               
               col (0.195008)

	1-369, gnl\|bosTau2\|chr16 (2330820-2331188)
	1-369, gnl\|Hg17\|chr1 (199866232-199866600)
	1-369, gnl\|Mm7\|chr1 (134093189-134092821)