Non-Coding RNA Search

Ss1.1-Pig1-132C11.5

Sequence:


               
               TAATAATTAACAATGACGAGGTTCATGAATAGGCTAATTTGGTAGGTAGCAAGCATCACT
TTTCAGGTCAGGTTAGAGCTTTTCCACTTGAGCAGAAATTTTGAAATCTCTTGGATGCTG
CTCAGAGTAGCAACCAATGATGTTTCAACTTACCTGTAATAGATTCTGGAAGAAATTTCT
GCCACTCGATGACTGCTTTAAATTCCAGGCTTAAAGAAACTTAGTAGCCTGCTATCACGC
CTACCCTGCAAGGATAGGTTATAACGAGTTTCAGTAGAAGAGTTACTCTGGTGTATAATG
TACTTGAAAAAGTAAAAAGCATTGCTGCTATTCTAAGGACTTTAACAGGAGAATGATTTC
TAAGCCAGCATCAAGACAGGTATGTGAAGTGCCCTGGAAGATGTTTGCTACCTACCAAAT
AATAATTAACAATGACGAGGTTCATGAATAGGCTAATTTGAAAAGTTTAAGCCGATTCAA
GGTCGTCCCCATGATAATGGCATTCTTACTTGTATGTGTGCTTTCCTTTTTTATTTATTG
TTAAGTATTCAAAATGAATATATGTAACATGTACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAATAATTAACAATGACGAGGTTCATGAATAGGCTAATTTGGTAGGTAGCAAGCATCACT
TTTCAGGTCAGGTTAGAGCTTTTCCACTTGAGCAGAAATTTTGAAATCTCTTGGATGCTG
CTCAGAGTAGCAACCAATGATGTTTCAACTTACCTGTAATAGATTCTGGAAGAAATTTCT
GCCACTCGATGACTGCTTTAAATTCCAGGCTTAAAGAAACTTAGTAGCCTGCTATCACGC
CTACCCTGCAAGGATAGGTTATAACGAGTTTCAGTAGAAGAGTTACTCTGGTGTATAATG
TACTTGAAAAAGTAAAAAGCATTGCTGCTATTCTAAGGACTTTAACAGGAGAATGATTTC
TAAGCCAGCATCAAGACAGGTATGTGAAGTGCCCTGGAAGATGTTTGCTACCTACCAAAT
AATAATTAACAATGACGAGGTTCATGAATAGGCTAATTTGAAAAGTTTAAGCCGATTCAA
GGTCGTCCCCATGATAATGGCATTCTTACTTGTATGTGTGCTTTCCTTTTTTATTTATTG
TTAAGTATTCAAAATGAATATATGTAACATGTACAT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               155-576, gnl|bosTau2|chr14 (40074958-40074542)
               

               
               155-576, gnl|Hg17|chr8 (98811199-98811621)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               155-576, gnl|bosTau2|chr14 (40074958-40074542)
               

               
               155-576, gnl|Hg17|chr8 (98811199-98811621)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               gul (0.177588)
               

               
               fco (0.157208)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               fco (0.157208)

	155-576, gnl\|bosTau2\|chr14 (40074958-40074542)
	155-576, gnl\|Hg17\|chr8 (98811199-98811621)