Non-Coding RNA Search

Ss1.1-Pig1-132E19.5

Sequence:


               
               TAAGAACATAAGCTTAAAGGCATTTCCGTGAGACCTATATGTGCAGTATTCCAGGAACAT
GACTATTGAACTGTGAAATGCAGCTGCGTTATTATTATAACGCAAATTTCTTATTTAGTT
CAATAGTCATGTTCCTTTGGTACATAGGACATGAAACGAAAGCCTTGCTGTGTGGTAAGT
TGAGCTTCTGTGATCGTGAGTAGAAAAGAGCAACATTGACCAAACCTGGGAAACATGAAC
GCAGTCTTGTATTGGAGGGTCTCTATAATTACTTTGCACACACATTGCAGGATGTTCATC
CAGTTCTAAATTGTACCGTCTGTGGCTTTTTGAAGTCTTCCCTTGACTCTAGTAAAATGT
AGTTTGAAACTTGTAAACAACTGTGTTTGCCAGAAACATCGTTCATGTGAACTAGGCAAG
TTTGCTTTTTTTCCCCTACTTCACCTAATCTAAATGTAAACCAGGCCAGCCTGAAAACTG
TGGCTGATGCTCTCTAGCCATCAGCATCTTTGAAATGCATCTTTACACTCTTGCACCAAA
ATTGAGGAATAAATGTCCACTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAGAACATAAGCTTAAAGGCATTTCCGTGAGACCTATATGTGCAGTATTCCAGGAACAT
GACTATTGAACTGTGAAATGCAGCTGCGTTATTATTATAACGCAAATTTCTTATTTAGTT
CAATAGTCATGTTCCTTTGGTACATAGGACATGAAACGAAAGCCTTGCTGTGTGGTAAGT
TGAGCTTCTGTGATCGTGAGTAGAAAAGAGCAACATTGACCAAACCTGGGAAACATGAAC
GCAGTCTTGTATTGGAGGGTCTCTATAATTACTTTGCACACACATTGCAGGATGTTCATC
CAGTTCTAAATTGTACCGTCTGTGGCTTTTTGAAGTCTTCCCTTGACTCTAGTAAAATGT
AGTTTGAAACTTGTAAACAACTGTGTTTGCCAGAAACATCGTTCATGTGAACTAGGCAAG
TTTGCTTTTTTTCCCCTACTTCACCTAATCTAAATGTAAACCAGGCCAGCCTGAAAACTG
TGGCTGATGCTCTCTAGCCATCAGCATCTTTGAAATGCATCTTTACACTCTTGCACCAAA
ATTGAGGAATAAATGTCCACTGCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-350, gnl|bosTau2|chr7 (30013442-30013100)
               

               
               1-350, gnl|Hg17|chr5 (138987633-138987983)
               

               
               1-350, gnl|Mm7|chr18 (36182708-36183051)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-350, gnl|bosTau2|chr7 (30013442-30013100)
               

               
               1-350, gnl|Hg17|chr5 (138987633-138987983)
               

               
               1-350, gnl|Mm7|chr18 (36182708-36183051)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               gul (0.177588)
               

               
               eye (0.170503)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               eye (0.170503)

	1-350, gnl\|bosTau2\|chr7 (30013442-30013100)
	1-350, gnl\|Hg17\|chr5 (138987633-138987983)
	1-350, gnl\|Mm7\|chr18 (36182708-36183051)