Ss1.1-Pig1-132L14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTACCGCCCAGAACCGTTTCCCGGTGGTGTGCTGGCGCAGCGGGCGCTCCAAGGCTGTGC TGCTGCGCTCCGGGGGCCTGCATGGCAAGGGGGTCGTCGGCCTCTTCAAGGCCCAGAACG CGCCATCTCCAGGCCAGTCCCAGGCAGACTCCAGCAGCCTGGAGCAGGAGAAGTACCTGC AGGCCGTGGTCAGTTCCATGCCCCGTTACGCAGATGCCTCAGGACGCAACACCCTCAGCG GCTTCTCCTCGGCCCACCTGGGCAGCCATGTGCCCAGCCCCAGAGCCAGGGTCACCACGC TGTCCAACCCTATGGCGGCCTCGGCCTCCAGACGGACCGCGCCCCGAGGTAAATGGGGCA GCGTCCGGGCCAGTGGGCGCAGTGCTGGGCTCGGCACTGACGTGGGCTCCCGGCTGGCAG GCAGAGACATGCTGGGTCCCCCCCAGGCCAACGGGGCGCCCCCTGACCCAGGCTTTCTGC GGCCCCAGCGTGCCGCCCTCTACATCATCGGAGACAAAGCCCAGCTTAAGGGCGTGCGAC CAGACCCGCTGCAGCAGTGGGAGCTGGTGCCCATCGAGGTGTTCGAGGCACGGCAGGTGA AGGCCAGCTTCAAGAAGCTGCTGAAGGCCTGTGTTCCAGGCTGTCCCGCTACCGAGCCTG GCCCAGCTTCCTTCCTGCGCTCGCTGGAGGACTCTGAGTGGCTAATCCAGATCCACAGGC TGCTGCAGGTGTCGGTGCTGGTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTACCGCCCAGAACCGTTTCCCGGTGGTGTGCTGGCGCAGCGGGCGCTCCAAGGCTGTGC TGCTGCGCTCCGGGGGCCTGCATGGCAAGGGGGTCGTCGGCCTCTTCAAGGCCCAGAACG CGCCATCTCCAGGCCAGTCCCAGGCAGACTCCAGCAGCCTGGAGCAGGAGAAGTACCTGC AGGCCGTGGTCAGTTCCATGCCCCGTTACGCAGATGCCTCAGGACGCAACACCCTCAGCG GCTTCTCCTCGGCCCACCTGGGCAGCCATGTGCCCAGCCCCAGAGCCAGGGTCACCACGC TGTCCAACCCTATGGCGGCCTCGGCCTCCAGACGGACCGCGCCCCGAGGTAAATGGGGCA GCGTCCGGGCCAGTGGGCGCAGTGCTGGGCTCGGCACTGACGTGGGCTCCCGGCTGGCAG GCAGAGACATGCTGGGTCCCCCCCAGGCCAACGGGGCGCCCCCTGACCCAGGCTTTCTGC GGCCCCAGCGTGCCGCCCTCTACATCATCGGAGACAAAGCCCAGCTTAAGGGCGTGCGAC CAGACCCGCTGCAGCAGTGGGAGCTGGTGCCCATCGAGGTGTTCGAGGCACGGCAGGTGA AGGCCAGCTTCAAGAAGCTGCTGAAGGCCTGTGTTCCAGGCTGTCCCGCTACCGAGCCTG GCCCAGCTTCCTTCCTGCGCTCGCTGGAGGACTCTGAGTGGCTAATCCAGATCCACAGGC TGCTGCAGGTGTCGGTGCTGGTGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 47 entry(ies) | More info |
| Aligned organism(s): 47 entry(ies) | Help | Less info |
| 129-270, gnl|bosTau2|chr5 (75821170-75821311) | |
| 129-270, gnl|canFam2|chr10 (19825313-19825155) | |
| 129-270, gnl|canFam2|chr10 (19825309-19825209) | |
| 129-270, gnl|canFam2|chr10 (19825165-19825304) | |
| 129-270, gnl|danRer3|chr4 (9896316-9896472) | |
| 129-270, gnl|danRer3|chr4 (9896321-9896418) | |
| 129-270, gnl|danRer3|chr4 (9896457-9896327) | |
| 129-270, gnl|echTel1|scaffold_216079 (6636-6477) | |
| 129-270, gnl|echTel1|scaffold_216079 (6631-6530) | |
| 129-270, gnl|echTel1|scaffold_216079 (6486-6622) | |
| 129-270, gnl|fr1|chrUn (276034896-276035030) | |
| 129-270, gnl|fr1|chrUn (276034900-276034987) | |
| 129-270, gnl|fr1|chrUn (276035026-276034896) | |
| 129-270, gnl|galGal2|chrUn (32207494-32207404) | |
| 129-270, gnl|galGal2|chrUn (32207376-32207466) | |
| 129-270, gnl|hg17|chr1 (11872756-11872900) | |
| 129-270, gnl|hg17|chr22 (49187818-49187980) | |
| 129-270, gnl|Hg17|chr22 (49187969-49187828) | |
| 129-270, gnl|hg17|chr8 (56526466-56526567) | |
| 129-270, gnl|mm7|chr15 (89382350-89382516) | |
| 129-270, gnl|mm7|chr15 (89382358-89382459) | |
| 129-270, gnl|mm7|chr15 (89382504-89382360) | |
| 129-270, gnl|Mm7|chr15 (89382502-89382361) | |
| 129-270, gnl|monDom2|scaffold_119 (918800-919097) | |
| 129-270, gnl|monDom2|scaffold_119 (918805-918909) | |
| 129-270, gnl|monDom2|scaffold_119 (918954-918807) | |
| 129-270, gnl|oryCun1|scaffold_60844 (89-256) | |
| 129-270, gnl|oryCun1|scaffold_60844 (101-196) | |
| 129-270, gnl|oryCun1|scaffold_60844 (241-101) | |
| 129-270, gnl|panTro1|chr1 (12089937-12090081) | |
| 129-270, gnl|panTro1|chr23 (49662498-49662660) | |
| 129-270, gnl|panTro1|chr7 (58220396-58220497) | |
| 129-270, gnl|rheMac2|chr1 (14981371-14981515) | |
| 129-270, gnl|rheMac2|chr10 (94479350-94479512) | |
| 129-270, gnl|rheMac2|chr8 (58059951-58060052) | |
| 129-270, gnl|rn3|chr7 (127628943-127629110) | |
| 129-270, gnl|rn3|chr7 (127628952-127629053) | |
| 129-270, gnl|rn3|chr7 (127629098-127628957) | |
| 129-270, gnl|tetNig1|chrUn_random (121504230-121504356) | |
| 129-270, gnl|tetNig1|chrUn_random (121504234-121504321) | |
| 129-270, gnl|tetNig1|chrUn_random (121504360-121504230) | |
| 129-270, gnl|xenTro1|scaffold_534 (745350-745495) | |
| 129-270, gnl|xenTro1|scaffold_534 (745339-745452) | |
| 129-270, gnl|xenTro1|scaffold_534 (745487-745369) | |
| 529-713, gnl|bosTau2|chr5 (75824373-75824557) | |
| 529-713, gnl|Hg17|chr22 (49184970-49184786) | |
| 529-713, gnl|Mm7|chr15 (89378192-89378008) |
| Aligned organism(s): 47 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 129-270, gnl|bosTau2|chr5 (75821170-75821311) | |
| 129-270, gnl|canFam2|chr10 (19825313-19825155) | |
| 129-270, gnl|canFam2|chr10 (19825309-19825209) | |
| 129-270, gnl|canFam2|chr10 (19825165-19825304) | |
| 129-270, gnl|danRer3|chr4 (9896316-9896472) | |
| 129-270, gnl|danRer3|chr4 (9896321-9896418) | |
| 129-270, gnl|danRer3|chr4 (9896457-9896327) | |
| 129-270, gnl|echTel1|scaffold_216079 (6636-6477) | |
| 129-270, gnl|echTel1|scaffold_216079 (6631-6530) | |
| 129-270, gnl|echTel1|scaffold_216079 (6486-6622) | |
| 129-270, gnl|fr1|chrUn (276034896-276035030) | |
| 129-270, gnl|fr1|chrUn (276034900-276034987) | |
| 129-270, gnl|fr1|chrUn (276035026-276034896) | |
| 129-270, gnl|galGal2|chrUn (32207494-32207404) | |
| 129-270, gnl|galGal2|chrUn (32207376-32207466) | |
| 129-270, gnl|hg17|chr1 (11872756-11872900) | |
| 129-270, gnl|hg17|chr22 (49187818-49187980) | |
| 129-270, gnl|Hg17|chr22 (49187969-49187828) | |
| 129-270, gnl|hg17|chr8 (56526466-56526567) | |
| 129-270, gnl|mm7|chr15 (89382350-89382516) | |
| 129-270, gnl|mm7|chr15 (89382358-89382459) | |
| 129-270, gnl|mm7|chr15 (89382504-89382360) | |
| 129-270, gnl|Mm7|chr15 (89382502-89382361) | |
| 129-270, gnl|monDom2|scaffold_119 (918800-919097) | |
| 129-270, gnl|monDom2|scaffold_119 (918805-918909) | |
| 129-270, gnl|monDom2|scaffold_119 (918954-918807) | |
| 129-270, gnl|oryCun1|scaffold_60844 (89-256) | |
| 129-270, gnl|oryCun1|scaffold_60844 (101-196) | |
| 129-270, gnl|oryCun1|scaffold_60844 (241-101) | |
| 129-270, gnl|panTro1|chr1 (12089937-12090081) | |
| 129-270, gnl|panTro1|chr23 (49662498-49662660) | |
| 129-270, gnl|panTro1|chr7 (58220396-58220497) | |
| 129-270, gnl|rheMac2|chr1 (14981371-14981515) | |
| 129-270, gnl|rheMac2|chr10 (94479350-94479512) | |
| 129-270, gnl|rheMac2|chr8 (58059951-58060052) | |
| 129-270, gnl|rn3|chr7 (127628943-127629110) | |
| 129-270, gnl|rn3|chr7 (127628952-127629053) | |
| 129-270, gnl|rn3|chr7 (127629098-127628957) | |
| 129-270, gnl|tetNig1|chrUn_random (121504230-121504356) | |
| 129-270, gnl|tetNig1|chrUn_random (121504234-121504321) | |
| 129-270, gnl|tetNig1|chrUn_random (121504360-121504230) | |
| 129-270, gnl|xenTro1|scaffold_534 (745350-745495) | |
| 129-270, gnl|xenTro1|scaffold_534 (745339-745452) | |
| 129-270, gnl|xenTro1|scaffold_534 (745487-745369) | |
| 529-713, gnl|bosTau2|chr5 (75824373-75824557) | |
| 529-713, gnl|Hg17|chr22 (49184970-49184786) | |
| 529-713, gnl|Mm7|chr15 (89378192-89378008) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |