Non-Coding RNA Search

Ss1.1-Pig1-132P20.5

Sequence:


               
               CCACCTCCACCACCCTGGTGTGGGCGAGTCCTGCACCCCGCCTGGCATCTGCGCAAATGT
TGACTGGACGGGACCAACGGCTGGGGGTGGGGTCGCCGAGGCTGCACGGGACGCTGGTGG
CCGTGCGAGTCCCAGCCGTGCTGGGCGACACAAGTTTACGTTTGGCTGAGTGGAGCTGAG
TGCATGGATCCTGTGCGTGTGAGTGGGGGCCCCTCCCGGCCCCGCCCGCGAGCCTGCTGT
GTCCACGCAGAGGAGGTGCTAGTCCTGCTGCCCCCCACCCCCCGCATGCCCCACGGCTGC
CCACAGCCTGGCCCCCAGCACAAGCCGTGGCCGTCCGTCCACCACACCTCCATCCACAGC
CCCCGGAGGATCGCTGTACGAGTTTTTTATTCACAAGTCTTCTCCCCACCGCCCCCCCCA
GCCTTCGCCTTGGGATCGGTTAACTTATTTGTCTGGCTTCTTGGAGGCACCTCTGTGCGT
TTGTCCTCAGGTGGTCTTATGGATGTCTTTCAGAAAATGGTTATTTTATATGATTTGTCA
TGGAATTTGTTCTAATAAATCATTCTTCTATCATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACCTCCACCACCCTGGTGTGGGCGAGTCCTGCACCCCGCCTGGCATCTGCGCAAATGT
TGACTGGACGGGACCAACGGCTGGGGGTGGGGTCGCCGAGGCTGCACGGGACGCTGGTGG
CCGTGCGAGTCCCAGCCGTGCTGGGCGACACAAGTTTACGTTTGGCTGAGTGGAGCTGAG
TGCATGGATCCTGTGCGTGTGAGTGGGGGCCCCTCCCGGCCCCGCCCGCGAGCCTGCTGT
GTCCACGCAGAGGAGGTGCTAGTCCTGCTGCCCCCCACCCCCCGCATGCCCCACGGCTGC
CCACAGCCTGGCCCCCAGCACAAGCCGTGGCCGTCCGTCCACCACACCTCCATCCACAGC
CCCCGGAGGATCGCTGTACGAGTTTTTTATTCACAAGTCTTCTCCCCACCGCCCCCCCCA
GCCTTCGCCTTGGGATCGGTTAACTTATTTGTCTGGCTTCTTGGAGGCACCTCTGTGCGT
TTGTCCTCAGGTGGTCTTATGGATGTCTTTCAGAAAATGGTTATTTTATATGATTTGTCA
TGGAATTTGTTCTAATAAATCATTCTTCTATCATGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               192-576, gnl|bosTau2|chr15 (21879511-21879130)
               

               
               192-576, gnl|Hg17|chr14 (104433729-104434125)
               

               
               192-576, gnl|Mm7|chr12 (110271164-110271521)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               192-576, gnl|bosTau2|chr15 (21879511-21879130)
               

               
               192-576, gnl|Hg17|chr14 (104433729-104434125)
               

               
               192-576, gnl|Mm7|chr12 (110271164-110271521)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.478583)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.478583)

	192-576, gnl\|bosTau2\|chr15 (21879511-21879130)
	192-576, gnl\|Hg17\|chr14 (104433729-104434125)
	192-576, gnl\|Mm7\|chr12 (110271164-110271521)