Non-Coding RNA Search

Ss1.1-Pig1-138L13.5

Sequence:


               
               ACCAAAATGAAGAAATTGTNAGGTATTTGGAGGAGAAGAATNAGTTGTAAAATAACCTTT
TGTTTTATNTGGGTCTTGTACTTACTTAAGTTGCTACTTAAATGTGCGTTGAAATAGCCC
CCCCTTGACTCAGCTCCAAACTGAAAAGGGCAGAGTGGCTTGGGTTGCTGGTCCAGGATC
CGGAAAGGGCCCATCTTGCCGGGAAAGAAATGAATGTGAGCTTTGAGGCAGTCTGACCAC
CCAGGTTTTAGCATTTCTAGTCCCCCCCAACTGTAAAAAATGCAAGTTCTTCTGGAAAAT
GTAGTATAGACATTGCATTGAACATGGGTTTTTCTTACAACTTCATCTCGGGTTTGTTGA
ATGTGCAGTCCCTTTGTTTAATGCCGTATCTTGCTTAAATATTCTTGTTGGGAACAGCTG
GAGACTTTTAACTGGGTGCCTGGTTCTGTTTTCTGGGAAGGCAACATGGATTCTGTTGAA
AGCAAGAGCTTTAAAAGTGAATTGGGGGTGGGGGGTGCAAGTTTTTTGGCTTGTTAAGAA
GCTTCCTGTGGTTCTGGGCCCAAGGTGTGACATATATTTCCTGCTATTCGCTTCTCTTAA
GAAGCATGGGCTTGGCTGTTCCTTTTGAGGAAAACTCTTAATAAACCTTCTTCCCATTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCAAAATGAAGAAATTGTNAGGTATTTGGAGGAGAAGAATNAGTTGTAAAATAACCTTT
TGTTTTATNTGGGTCTTGTACTTACTTAAGTTGCTACTTAAATGTGCGTTGAAATAGCCC
CCCCTTGACTCAGCTCCAAACTGAAAAGGGCAGAGTGGCTTGGGTTGCTGGTCCAGGATC
CGGAAAGGGCCCATCTTGCCGGGAAAGAAATGAATGTGAGCTTTGAGGCAGTCTGACCAC
CCAGGTTTTAGCATTTCTAGTCCCCCCCAACTGTAAAAAATGCAAGTTCTTCTGGAAAAT
GTAGTATAGACATTGCATTGAACATGGGTTTTTCTTACAACTTCATCTCGGGTTTGTTGA
ATGTGCAGTCCCTTTGTTTAATGCCGTATCTTGCTTAAATATTCTTGTTGGGAACAGCTG
GAGACTTTTAACTGGGTGCCTGGTTCTGTTTTCTGGGAAGGCAACATGGATTCTGTTGAA
AGCAAGAGCTTTAAAAGTGAATTGGGGGTGGGGGGTGCAAGTTTTTTGGCTTGTTAAGAA
GCTTCCTGTGGTTCTGGGCCCAAGGTGTGACATATATTTCCTGCTATTCGCTTCTCTTAA
GAAGCATGGGCTTGGCTGTTCCTTTTGAGGAAAACTCTTAATAAACCTTCTTCCCATTTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               535-660, gnl|bosTau2|chr3 (60963327-60963449)
               

               
               535-660, gnl|Hg17|chr1 (111971231-111971352)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               535-660, gnl|bosTau2|chr3 (60963327-60963449)
               

               
               535-660, gnl|Hg17|chr1 (111971231-111971352)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fat (0.147427)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)

	535-660, gnl\|bosTau2\|chr3 (60963327-60963449)
	535-660, gnl\|Hg17\|chr1 (111971231-111971352)