Ss1.1-Pig1-18M04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAGGAAGAATGGAAGCTGCTGGATAAACCTGAGCAATTCTTACATGAGTTAGCCCAGAT TCCTAATTTTGCTGAGCGTGCCCAATGCATAATCTTCAGATCTGTCTTCTCGGAGAGTAT CAGCGCCTTGCACCGCAAAGTAGAGATCATCACACGGGCTTCAAAGGGCTTGCTGCACAT GAAGAGTGTGAAGGATATTTTAGCTCTCATTCTTGCTTTTGGAAATTATATGAATGGAGG AAATAGGACTCGAGGACAAGCAGATGGATATAGCTTAGAAATTCTGCCCAAACTCAAGGA CGTCAAAAGTCGGGATAATGGGATTAATCTGGTGGACTATGTCGTGAAATACTACCTGCG TTACTATGATCAGGAAGCAGGAACAGAAAAGAGCGTTTTCCCCCTGCCTGAACCACAAGA TTTCTTTCTGGCCTCCCAAGTCAAATTTGAAGACCTTGTAAAAGATTTGCGAAAACTGAA GAGACAACTAGAAGCAAGTGAGAAACAGATGGTGGTGGTGTGTAAGGAGTCGCCTAAGGA ATATCTGCAGCCGTTCAAGGACCGGCTGGAAGAGTTCTTTCAGAAAGCCAAAAAAGAGCA TAAAATGGAAGAAAGTCACTTGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAGGAAGAATGGAAGCTGCTGGATAAACCTGAGCAATTCTTACATGAGTTAGCCCAGAT TCCTAATTTTGCTGAGCGTGCCCAATGCATAATCTTCAGATCTGTCTTCTCGGAGAGTAT CAGCGCCTTGCACCGCAAAGTAGAGATCATCACACGGGCTTCAAAGGGCTTGCTGCACAT GAAGAGTGTGAAGGATATTTTAGCTCTCATTCTTGCTTTTGGAAATTATATGAATGGAGG AAATAGGACTCGAGGACAAGCAGATGGATATAGCTTAGAAATTCTGCCCAAACTCAAGGA CGTCAAAAGTCGGGATAATGGGATTAATCTGGTGGACTATGTCGTGAAATACTACCTGCG TTACTATGATCAGGAAGCAGGAACAGAAAAGAGCGTTTTCCCCCTGCCTGAACCACAAGA TTTCTTTCTGGCCTCCCAAGTCAAATTTGAAGACCTTGTAAAAGATTTGCGAAAACTGAA GAGACAACTAGAAGCAAGTGAGAAACAGATGGTGGTGGTGTGTAAGGAGTCGCCTAAGGA ATATCTGCAGCCGTTCAAGGACCGGCTGGAAGAGTTCTTTCAGAAAGCCAAAAAAGAGCA TAAAATGGAAGAAAGTCACTTGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 160-314, gnl|bosTau2|chr10 (20566599-20566445) | |
| 160-314, gnl|canFam2|chr30 (5055364-5055207) | |
| 160-314, gnl|danRer3|chr3 (40293158-40293001) | |
| 160-314, gnl|dasNov1|scaffold_4203 (84554-84716) | |
| 160-314, gnl|echTel1|scaffold_322407 (41407-41245) | |
| 160-314, gnl|fr1|chrUn (281495091-281495224) | |
| 160-314, gnl|galGal2|chr5 (27379413-27379253) | |
| 160-314, gnl|hg17|chr15 (30979470-30979627) | |
| 160-314, gnl|Hg17|chr15 (30979626-30979471) | |
| 160-314, gnl|loxAfr1|scaffold_15022 (50035-49873) | |
| 160-314, gnl|mm7|chr2 (113445411-113445254) | |
| 160-314, gnl|Mm7|chr2 (113445250-113445408) | |
| 160-314, gnl|monDom2|scaffold_12 (10294114-10294276) | |
| 160-314, gnl|oryCun1|scaffold_215412 (141917-141760) | |
| 160-314, gnl|panTro1|chr16 (30594455-30594612) | |
| 160-314, gnl|rheMac2|chr7 (11128026-11128183) | |
| 160-314, gnl|rn3|chr3 (99342184-99342027) | |
| 160-314, gnl|tetNig1|chr10 (4086302-4086454) | |
| 372-504, gnl|bosTau2|chr10 (20561047-20560915) | |
| 372-504, gnl|canFam2|chr30 (5062872-5062666) | |
| 372-504, gnl|danRer3|chr3 (40297922-40297722) | |
| 372-504, gnl|dasNov1|scaffold_4203 (76568-76774) | |
| 372-504, gnl|echTel1|scaffold_322407 (51603-51402) | |
| 372-504, gnl|fr1|chrUn (281493014-281493175) | |
| 372-504, gnl|galGal2|chr5 (27383759-27383553) | |
| 372-504, gnl|hg17|chr15 (30967633-30967838) | |
| 372-504, gnl|Hg17|chr15 (30967787-30967655) | |
| 372-504, gnl|loxAfr1|scaffold_2380 (14716-14916) | |
| 372-504, gnl|mm7|chr2 (113453565-113453357) | |
| 372-504, gnl|Mm7|chr2 (113453405-113453537) | |
| 372-504, gnl|monDom2|scaffold_12 (10287390-10287605) | |
| 372-504, gnl|oryCun1|scaffold_215412 (151132-150927) | |
| 372-504, gnl|panTro1|chr16 (30582551-30582756) | |
| 372-504, gnl|rheMac2|chr7 (11115798-11116003) | |
| 372-504, gnl|rn3|chr3 (99350073-99349865) | |
| 372-504, gnl|tetNig1|chr10 (4085952-4086108) | |
| 372-504, gnl|xenTro1|scaffold_628 (475192-475397) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 160-314, gnl|bosTau2|chr10 (20566599-20566445) | |
| 160-314, gnl|canFam2|chr30 (5055364-5055207) | |
| 160-314, gnl|danRer3|chr3 (40293158-40293001) | |
| 160-314, gnl|dasNov1|scaffold_4203 (84554-84716) | |
| 160-314, gnl|echTel1|scaffold_322407 (41407-41245) | |
| 160-314, gnl|fr1|chrUn (281495091-281495224) | |
| 160-314, gnl|galGal2|chr5 (27379413-27379253) | |
| 160-314, gnl|hg17|chr15 (30979470-30979627) | |
| 160-314, gnl|Hg17|chr15 (30979626-30979471) | |
| 160-314, gnl|loxAfr1|scaffold_15022 (50035-49873) | |
| 160-314, gnl|mm7|chr2 (113445411-113445254) | |
| 160-314, gnl|Mm7|chr2 (113445250-113445408) | |
| 160-314, gnl|monDom2|scaffold_12 (10294114-10294276) | |
| 160-314, gnl|oryCun1|scaffold_215412 (141917-141760) | |
| 160-314, gnl|panTro1|chr16 (30594455-30594612) | |
| 160-314, gnl|rheMac2|chr7 (11128026-11128183) | |
| 160-314, gnl|rn3|chr3 (99342184-99342027) | |
| 160-314, gnl|tetNig1|chr10 (4086302-4086454) | |
| 372-504, gnl|bosTau2|chr10 (20561047-20560915) | |
| 372-504, gnl|canFam2|chr30 (5062872-5062666) | |
| 372-504, gnl|danRer3|chr3 (40297922-40297722) | |
| 372-504, gnl|dasNov1|scaffold_4203 (76568-76774) | |
| 372-504, gnl|echTel1|scaffold_322407 (51603-51402) | |
| 372-504, gnl|fr1|chrUn (281493014-281493175) | |
| 372-504, gnl|galGal2|chr5 (27383759-27383553) | |
| 372-504, gnl|hg17|chr15 (30967633-30967838) | |
| 372-504, gnl|Hg17|chr15 (30967787-30967655) | |
| 372-504, gnl|loxAfr1|scaffold_2380 (14716-14916) | |
| 372-504, gnl|mm7|chr2 (113453565-113453357) | |
| 372-504, gnl|Mm7|chr2 (113453405-113453537) | |
| 372-504, gnl|monDom2|scaffold_12 (10287390-10287605) | |
| 372-504, gnl|oryCun1|scaffold_215412 (151132-150927) | |
| 372-504, gnl|panTro1|chr16 (30582551-30582756) | |
| 372-504, gnl|rheMac2|chr7 (11115798-11116003) | |
| 372-504, gnl|rn3|chr3 (99350073-99349865) | |
| 372-504, gnl|tetNig1|chr10 (4085952-4086108) | |
| 372-504, gnl|xenTro1|scaffold_628 (475192-475397) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| bla (0.124347) |