Non-Coding RNA Search

Ss1.1-Pig1-1B20.3

Sequence:


               
               AAGAAGGAGATCTGGAACACCAAGGATTCAGTTGTGGCTCAGACTGGTTCAGGAGGCTCC
TTCCATGAGTTCTGCACGTCCGTCTGCCTCTCCCTGTATGAAGCCCAGCAGCAGCGCCCA
TGCACTGGGGTGGGTGGTGGTGGCCAGGCCCCAGCTCAGGGTGTGTGTGTGTGTGTGTGG
CAGGTCCTGCATGAGGTCAGCAATGGCAGCGTGGTGCACCGGCTCTGCAGCGATTCTTGC
TTCTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGTGCGGGGCT
TATATCTACACCAAGACCGGGAGCCCTGGCCCCGAGCTCCTCTTCCACGAGGGCCAACAA
AAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGGTGGGGCCGAGGGAGTAG
TGTTTTAGAGGGCTGTGGAAGGGGGTGCGGTTCTTGGGTGTGATAAATAAAGGTGCCTGA
CGGGGCGAGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCTGTTATGT
TTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTTATATCATCATCTATACTTT
TTTTTGTATGCCTGAACTATTTCATGTTTTAAAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAAGGAGATCTGGAACACCAAGGATTCAGTTGTGGCTCAGACTGGTTCAGGAGGCTCC
TTCCATGAGTTCTGCACGTCCGTCTGCCTCTCCCTGTATGAAGCCCAGCAGCAGCGCCCA
TGCACTGGGGTGGGTGGTGGTGGCCAGGCCCCAGCTCAGGGTGTGTGTGTGTGTGTGTGG
CAGGTCCTGCATGAGGTCAGCAATGGCAGCGTGGTGCACCGGCTCTGCAGCGATTCTTGC
TTCTCCAAATTCCGGGCCAACAAGGGACTGAAAACCAACTGTTGTGACCAGTGCGGGGCT
TATATCTACACCAAGACCGGGAGCCCTGGCCCCGAGCTCCTCTTCCACGAGGGCCAACAA
AAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAGGTGGGGCCGAGGGAGTAG
TGTTTTAGAGGGCTGTGGAAGGGGGTGCGGTTCTTGGGTGTGATAAATAAAGGTGCCTGA
CGGGGCGAGGGCTGGGAGAAATAAAACAAATAAAGGGGGTTTCAATTGTATCTGTTATGT
TTTATTTTTGAAGCTGGCTGGTGGATACACAGGTCTTTGTTATATCATCATCTATACTTT
TTTTTGTATGCCTGAACTATTTCATGTTTTAAAAAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               118-636, gnl|bosTau2|chrX (22025707-22025191)
               

               
               118-636, gnl|Hg17|chrX (70252614-70252101)
               

               
               118-636, gnl|Mm7|chrX (96742827-96742314)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               118-636, gnl|bosTau2|chrX (22025707-22025191)
               

               
               118-636, gnl|Hg17|chrX (70252614-70252101)
               

               
               118-636, gnl|Mm7|chrX (96742827-96742314)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pgl (0.118483)
               

               
               eje (0.0988338)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)
               

               
               eje (0.0988338)

	118-636, gnl\|bosTau2\|chrX (22025707-22025191)
	118-636, gnl\|Hg17\|chrX (70252614-70252101)
	118-636, gnl\|Mm7\|chrX (96742827-96742314)