Ss1.1-Pig1-20H24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGGAGAGAGGCCCAGGAAGCTGAGGTTCCCGACACCAGGAGCTGTTGGGAGAAAGCAAT ACGTTGTGCAGAATCTCTATGTATATTCTATTTTATTAAATTAATTGAATCTAGTATTTG CGGGATGTACAGCATTTTGTGACTGAAGAGACTTGTTTCCTTCTGCTTTTATGTGTCTCA GAATATTTTTGAGGCGAAGGCGTCTGTCTCTTGGCTATTTTAACCTAACTAGTCTAGTTA TATTCCCTCTTCTTGCAAAGCACAAGCTGGGACCGAGAGTGCATTACAGCCCTGGCGGGG GCCTGTCTTCAGTGGAGAGCAAGAACCATTTTGGAAACTGCAATGTAACTTATTTTCTCC TTTAACCTCATCATCCTTTTCTGTAGGAAAAAAAAAAAAAAGAGAGAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGGAGAGAGGCCCAGGAAGCTGAGGTTCCCGACACCAGGAGCTGTTGGGAGAAAGCAAT ACGTTGTGCAGAATCTCTATGTATATTCTATTTTATTAAATTAATTGAATCTAGTATTTG CGGGATGTACAGCATTTTGTGACTGAAGAGACTTGTTTCCTTCTGCTTTTATGTGTCTCA GAATATTTTTGAGGCGAAGGCGTCTGTCTCTTGGCTATTTTAACCTAACTAGTCTAGTTA TATTCCCTCTTCTTGCAAAGCACAAGCTGGGACCGAGAGTGCATTACAGCCCTGGCGGGG GCCTGTCTTCAGTGGAGAGCAAGAACCATTTTGGAAACTGCAATGTAACTTATTTTCTCC TTTAACCTCATCATCCTTTTCTGTAGGAAAAAAAAAAAAAAGAGAGAG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 121-235, + strand, RNAz p=0.93386 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 121-235, + strand, RNAz p=0.93386 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of AF190860, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 4-405, gnl|bosTau2|chr19 (31463209-31462800) | |
| 4-405, gnl|Hg17|chr17 (46059318-46059736) | |
| 4-405, gnl|Mm7|chr11 (94517954-94517529) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-405, gnl|bosTau2|chr19 (31463209-31462800) | |
| 4-405, gnl|Hg17|chr17 (46059318-46059736) | |
| 4-405, gnl|Mm7|chr11 (94517954-94517529) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| csk (0.140746) |