Non-Coding RNA Search

Ss1.1-Pig1-23F01.5

Sequence:


               
               AGGTGGCAGACATCCTGGAACCTACAGGTCTTCAGGAGGAGGCAGAACTGCCCGCCCAGA
TCCTGGCTGAGTTTGTGATGGACTCTCGGAAGAAAGACAAGCTCCTCTGCAGCCAGCTAC
AAGTAGTAGACTTCCTACAGAACTTCTTAATCCAGGAAGACACTGCGCAGGGCTTGGACC
CCTTGGCTTCTGAAGACACAAGCCGAAAGAGGGCAATTGAAGCCAAAGAGCAATGGAAAG
AGCTGAAGGCCACCTACCAGGAGCATGTGGAGGCCATCACAAGTGCCTTGACCCAGGCAC
TGCCCAAGATGGAGGAGGCCCAAAAGAAGCAAGCACAGCTACAAGAGACCCTTGAACAAC
TCCAGGCCAAGAAGCAAGTAGCTGTGGAAAAACTCAGAATAGCCCAGAAGCAGTGGCAGC
TGCAACAGGAGAAGCATCTGCAGCACCTGACAAAGGTTTCTGCAGAGGTGAAGGAACGTC
AGATGGGAACTCAGCAGGAGTTTGAACGTCTGTATCAGGAACTTGGGGCCCTGAAGCAAC
AGGCAAGGCAGGAGCAGGACAAACTGCAGAGGCATCAGACCTTCCTCCAGCTGCTTTACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGTGGCAGACATCCTGGAACCTACAGGTCTTCAGGAGGAGGCAGAACTGCCCGCCCAGA
TCCTGGCTGAGTTTGTGATGGACTCTCGGAAGAAAGACAAGCTCCTCTGCAGCCAGCTAC
AAGTAGTAGACTTCCTACAGAACTTCTTAATCCAGGAAGACACTGCGCAGGGCTTGGACC
CCTTGGCTTCTGAAGACACAAGCCGAAAGAGGGCAATTGAAGCCAAAGAGCAATGGAAAG
AGCTGAAGGCCACCTACCAGGAGCATGTGGAGGCCATCACAAGTGCCTTGACCCAGGCAC
TGCCCAAGATGGAGGAGGCCCAAAAGAAGCAAGCACAGCTACAAGAGACCCTTGAACAAC
TCCAGGCCAAGAAGCAAGTAGCTGTGGAAAAACTCAGAATAGCCCAGAAGCAGTGGCAGC
TGCAACAGGAGAAGCATCTGCAGCACCTGACAAAGGTTTCTGCAGAGGTGAAGGAACGTC
AGATGGGAACTCAGCAGGAGTTTGAACGTCTGTATCAGGAACTTGGGGCCCTGAAGCAAC
AGGCAAGGCAGGAGCAGGACAAACTGCAGAGGCATCAGACCTTCCTCCAGCTGCTTTACA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61811255|ref|XP_592436.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61811255|ref|XP_592436.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-600, gnl|bosTau2|chr26 (1653016-1652417)
               

               
               1-600, gnl|Hg17|chr10 (57790139-57788463)
               

               
               1-600, gnl|Mm7|chr13 (17404426-17405031)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-600, gnl|bosTau2|chr26 (1653016-1652417)
               

               
               1-600, gnl|Hg17|chr10 (57790139-57788463)
               

               
               1-600, gnl|Mm7|chr13 (17404426-17405031)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nje (0.16592)
               

               
               pty (0.142714)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)
               

               
               pty (0.142714)

	1-600, gnl\|bosTau2\|chr26 (1653016-1652417)
	1-600, gnl\|Hg17\|chr10 (57790139-57788463)
	1-600, gnl\|Mm7\|chr13 (17404426-17405031)