Non-Coding RNA Search

Ss1.1-Pig1-23P12.5

Sequence:


               
               CCCCATAGTTCACCGAGGACCCAGCTCCAGCTTGAATACACCCGGGACGTTCAGACGTGG
TCTGGATGACTCCACGGGGGGGACCCCCCTCACACCGGCGGCCCGGATATCAGCCCTCAA
TATCGTGGGCGACCTGCTTCGGAAAGTGGGGGCTCTGGAGTCCAAACTTGCATCCTGCCG
GAACTTCGTGTACGATCAGTCCCCAAACCGAACAAGTGGCCCAGGCTCAGGTCGGGGCAG
CAAGAGCAGAGATGGCGGCGACCGACGGCCAGGCAGCACCAGCGTGCCTCTGGGTGATAA
AGGGAGAGAAAATTGGGACCCAGTGAGACCCTGCTTCTGACTTTGATGTTCACTCTTAGA
ACTTTGTGGGCCCCGTGCTAGCCAGTGTCTAACAGCCGTAATGTCCGCTTAATTTGGTTT
GCTCTGTCTGAAGGTTGGGAAAACGCCTGGAGTTTGGGAAGCCGCCTTCAAATATTTCCT
CACCGTCGCTGCCATCAGCCCAGGGTGTAGTCAAGATGTTGCTTTAGGAAATCCATGAAG
CCGAGCCCCCTGGTGTCCGTGTGGGAGTCATTACCCTTCTTCCTTCTTTGAACTAGGTTT
TTGTTTCGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTTTGCTTTTTGGGCCACACCCTGT
GGCATATGGAGATGCCCAGGCTAGGTGTTGAATCAGAGCTGTAGCTGCCGGCCTGCTGCT
GCTGGAGCCACAGCAACACCAGATCCGAGCCACATCTGTGACCTACACCACAGCTCGTGG
CAATGCCAGATCCTCAACCCACTGAGTGAGACCAGGGATCACACCACGTCCTCTTGGATA
CCAGTCAGATTCGTTTTTGCTGCACCACAATGGGAGCTCCCTAGGTTTTTGCATTTAAAA
TTTAGTTTGAGAAATACGAGCGTGCAGTCGCACTAGCCAGCAACCAAGGTGGTCACCTGT
GGCCTTTGGGTCGTCCCCACGAAGTGCTGTCTTGGAACCCCAACACTGCACACCCCCGCC
TCCTCATTGGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCCATAGTTCACCGAGGACCCAGCTCCAGCTTGAATACACCCGGGACGTTCAGACGTGG
TCTGGATGACTCCACGGGGGGGACCCCCCTCACACCGGCGGCCCGGATATCAGCCCTCAA
TATCGTGGGCGACCTGCTTCGGAAAGTGGGGGCTCTGGAGTCCAAACTTGCATCCTGCCG
GAACTTCGTGTACGATCAGTCCCCAAACCGAACAAGTGGCCCAGGCTCAGGTCGGGGCAG
CAAGAGCAGAGATGGCGGCGACCGACGGCCAGGCAGCACCAGCGTGCCTCTGGGTGATAA
AGGGAGAGAAAATTGGGACCCAGTGAGACCCTGCTTCTGACTTTGATGTTCACTCTTAGA
ACTTTGTGGGCCCCGTGCTAGCCAGTGTCTAACAGCCGTAATGTCCGCTTAATTTGGTTT
GCTCTGTCTGAAGGTTGGGAAAACGCCTGGAGTTTGGGAAGCCGCCTTCAAATATTTCCT
CACCGTCGCTGCCATCAGCCCAGGGTGTAGTCAAGATGTTGCTTTAGGAAATCCATGAAG
CCGAGCCCCCTGGTGTCCGTGTGGGAGTCATTACCCTTCTTCCTTCTTTGAACTAGGTTT
TTGTTTCGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTTTGCTTTTTGGGCCACACCCTGT
GGCATATGGAGATGCCCAGGCTAGGTGTTGAATCAGAGCTGTAGCTGCCGGCCTGCTGCT
GCTGGAGCCACAGCAACACCAGATCCGAGCCACATCTGTGACCTACACCACAGCTCGTGG
CAATGCCAGATCCTCAACCCACTGAGTGAGACCAGGGATCACACCACGTCCTCTTGGATA
CCAGTCAGATTCGTTTTTGCTGCACCACAATGGGAGCTCCCTAGGTTTTTGCATTTAAAA
TTTAGTTTGAGAAATACGAGCGTGCAGTCGCACTAGCCAGCAACCAAGGTGGTCACCTGT
GGCCTTTGGGTCGTCCCCACGAAGTGCTGTCTTGGAACCCCAACACTGCACACCCCCGCC
TCCTCATTGGTG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q9ERR0_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9ERR0_MOUSE

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               303-545, gnl|bosTau2|chr25 (16248838-16249081)
               

               
               303-545, gnl|Hg17|chr16 (15700954-15701199)
               

               
               303-545, gnl|Mm7|chr16 (13738097-13738331)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               303-545, gnl|bosTau2|chr25 (16248838-16249081)
               

               
               303-545, gnl|Hg17|chr16 (15700954-15701199)
               

               
               303-545, gnl|Mm7|chr16 (13738097-13738331)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fty (0.17584)
               

               
               eru (0.120048)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               eru (0.120048)
               

               
               cty (0.10408)

	303-545, gnl\|bosTau2\|chr25 (16248838-16249081)
	303-545, gnl\|Hg17\|chr16 (15700954-15701199)
	303-545, gnl\|Mm7\|chr16 (13738097-13738331)