Non-Coding RNA Search

Ss1.1-Pig1-24D15.5

Sequence:


               
               CCGCGGTGGCGGCCGCGGCTCGAGCACTTTTCTCGAACAAGATCACACCTATTCAGTCCA
AAGAAGCATACTGAGCCCACCCAGTAGAAGAAGCAGGAAGATATGGTCCATTCATCCAAT
CGTATGTGTAGTGTTGGTGCCGTGTCCCTATTAGAAGCTAGCCGCGATAGCTCGCAGCGT
CTTTTCTAGTTTAAATGGTGAACTGATAAGAAAACTAATGAATAGGAAGAGTTAACGAAG
AGGCTCTTCTGCTTTTCTAATAGAAGGGTCACCTCCACAGGTTTAAGATGTCTCTGCACA
TGTCTCAGGTCCTTCATAAGAAAGCAAGCAAGCACGTACAGGCTGGATTTCTTTCCCATG
TGTGTAACCCAAGCTCTAGCTGATTTGACAGCCATGTTGTCGCCATAGTAGCCTTTTTCA
CGTGAGGGTGGTGGTCCCTGGTTCTTCCCAGCCCCCAAAGGCTGAACCACAGCACTAGGA
AGCCTGAGAATGTCAAGGGCTGGAGCCTAGCTTTGTCCTGGCATAGACGCCCTCCTGGTG
ACAGTGGGATTGAAGCCAGCTGCTCTCAGTGGCCTTGAGTGGCTCTCCACAGTTCATTTT
TTTCTGTTAGGTATGACACCTTTCTGCATCCATGCTTCATAGAATCACAGAATCTCTCCT
TTCCGGATATCCTGGAATGAGAGGATTTGGTTTCTACCATGATAGACTATTTTTTTTACA
TCTATTTTCTCCCTTCCTAGACTGTTACAAATACAAATTGTTACTGCTTTTTTCCCCTCT
CCACTTCCTTTCTAAGAGCCGAGAGCTGTGGGATGGTATTGGCTCTCTCTTGCACCAGGA
TCTGAGCTATGTGAAGGGTCTCCTTTAACTGCTGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGCGGTGGCGGCCGCGGCTCGAGCACTTTTCTCGAACAAGATCACACCTATTCAGTCCA
AAGAAGCATACTGAGCCCACCCAGTAGAAGAAGCAGGAAGATATGGTCCATTCATCCAAT
CGTATGTGTAGTGTTGGTGCCGTGTCCCTATTAGAAGCTAGCCGCGATAGCTCGCAGCGT
CTTTTCTAGTTTAAATGGTGAACTGATAAGAAAACTAATGAATAGGAAGAGTTAACGAAG
AGGCTCTTCTGCTTTTCTAATAGAAGGGTCACCTCCACAGGTTTAAGATGTCTCTGCACA
TGTCTCAGGTCCTTCATAAGAAAGCAAGCAAGCACGTACAGGCTGGATTTCTTTCCCATG
TGTGTAACCCAAGCTCTAGCTGATTTGACAGCCATGTTGTCGCCATAGTAGCCTTTTTCA
CGTGAGGGTGGTGGTCCCTGGTTCTTCCCAGCCCCCAAAGGCTGAACCACAGCACTAGGA
AGCCTGAGAATGTCAAGGGCTGGAGCCTAGCTTTGTCCTGGCATAGACGCCCTCCTGGTG
ACAGTGGGATTGAAGCCAGCTGCTCTCAGTGGCCTTGAGTGGCTCTCCACAGTTCATTTT
TTTCTGTTAGGTATGACACCTTTCTGCATCCATGCTTCATAGAATCACAGAATCTCTCCT
TTCCGGATATCCTGGAATGAGAGGATTTGGTTTCTACCATGATAGACTATTTTTTTTACA
TCTATTTTCTCCCTTCCTAGACTGTTACAAATACAAATTGTTACTGCTTTTTTCCCCTCT
CCACTTCCTTTCTAAGAGCCGAGAGCTGTGGGATGGTATTGGCTCTCTCTTGCACCAGGA
TCTGAGCTATGTGAAGGGTCTCCTTTAACTGCTGGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               27-331, gnl|bosTau2|chr19 (5989389-5989084)
               

               
               27-331, gnl|Hg17|chr17 (26697287-26697590)
               

               
               27-331, gnl|Mm7|chr2 (72478270-72478548)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               27-331, gnl|bosTau2|chr19 (5989389-5989084)
               

               
               27-331, gnl|Hg17|chr17 (26697287-26697590)
               

               
               27-331, gnl|Mm7|chr2 (72478270-72478548)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cki (0.165235)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)

	27-331, gnl\|bosTau2\|chr19 (5989389-5989084)
	27-331, gnl\|Hg17\|chr17 (26697287-26697590)
	27-331, gnl\|Mm7\|chr2 (72478270-72478548)